| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4303 |
|---|
| Symbol | |
|---|
| ID | 3907271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5135464 |
|---|
| End bp | 5135994 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881630 |
|---|
| Product | putative serine/threonine kinase anti-sigma factor |
|---|
| Protein accession | YP_483378 |
|---|
| Protein GI | 86742978 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG TTGAGCTGCG GTTCGCTGCA CTGAACGGGC ACGTTCGTAC CGCCAGGATG
ATCGCGACGG CGGTCAGCCG GCGCGCGGGA GTTCCGGTCA GCGCGGCCGA CGAGATCAAA
CTTGCGGTGA CGGAGGCATG CACCCGAGCG GTGCGCGTCA ACCGCAGGCA TGCGCCGCAG
GCCCCGGTGC ATGTCGCGCT CACCGATGGC GCCGATTCCT TCACCATCAC GGTGGCCGAC
TGCGGCCGGA CCGGAGACGA GGTCGCCCCC GGTCCGGACG GTGGCCTCGT CACCGCGACC
ACCCTGCTCG AACTCGGATC CGAGTCGACT CAGCCGCCGG GTTGGGCGGA ACCGGCGGAC
GACGATCCCT CGGCGGACAA CTCTGGTTTC CCACCGGGGC TCGGACTCGC CCTCATCGAG
GGACTCGTCG ACGAGATCGA GATCAGGCGT GGCCCCGACG GCGTGGGTAC GGTTGTCGCG
ATGACCTGGC ACACCGGCGC CACATCGGAC CCCTGCGAAT CCGCGGTGTA G
|
|---|
| Protein sequence | MPTVELRFAA LNGHVRTARM IATAVSRRAG VPVSAADEIK LAVTEACTRA VRVNRRHAPQ
APVHVALTDG ADSFTITVAD CGRTGDEVAP GPDGGLVTAT TLLELGSEST QPPGWAEPAD
DDPSADNSGF PPGLGLALIE GLVDEIEIRR GPDGVGTVVA MTWHTGATSD PCESAV
|
|---|
| |