Gene Francci3_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4299 
Symbol 
ID3907267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5130348 
End bp5131235 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID637881626 
ProductTadE-like 
Protein accessionYP_483374 
Protein GI86742974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.288116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCCTT CCCGCCTTTC TCCTGCTCGG AGTGGTCCCC ATGGTCCTCG GATCCGTCCC 
CGCGCTGTTG CCGGCCTGAA GTCCCGATCA TCCAGCTGCC ACCGCGGCGC CAAGCGCCCA
GGTCTGACCC ATCGCTCGAT CCCGATCCTC CCCCGTCCCG GAGGTAGTTC TCATGTTCCT
GGCAGCCCGC TCCTCGTGCC GACGCCTGTC GCGATGGCCG GTGTCCCGGC GGCTTCTCAG
CGTGTGGCGC CCGGCCGTCC AGGCCCGCGA CCACGGCATG TCCACCGCCG AGTACGCGGT
CGGCACGCTT GCGGCCGTGG CGTTCGCCGG CGTCCTCTAC GCGGTGGTAT CGAGCTCCGC
GACCCGGTCG CTGGTCTCCT CGGTGGTGCA GCGCGCGCTG ACCGTGGCGT TCTGAGCGCG
GCCGTGATGC CTGTGCGCTC CTCCCAGCGG CCGCCGCGGC CGGTGACCCA CCGACGTGGG
AGATCCGTCC GCGGGTCGGA CCGCGGCCAG GCCACCGCCG AGCTCGCGAT TGGCCTGCCC
TCACTGTTCG TCGTCTTCTT CCTGGCTGCC TGGATGCTCG GTGCCGTCGC GGCCCAGACC
CGATGCGCCG ACGCGGCACG CATCGGCGCC CGCCTGGCCG CCAGGGGGGA GCCGGATTCG
GCCGTGCACA CCATGGTGAT CCAGGCGGCA CCCGTCGGCT CCACCGTGAC GCTGCACCGC
GGCGCGGGTC GGCTCGAGGT ACAGGTGTCG GTGCACGTCG GTGGCATCGG CGTCAGCCGG
CTGGTTCCCG GCATCGAGGT GGCGGCGCGG GCCGTCACCC CCGTCGAGGC GACGGTCGAT
CTTCCGTCCG ATGCCCCCAC CGGATGCCCG GCCCGGATGG TGCCGTGA
 
Protein sequence
MLPSRLSPAR SGPHGPRIRP RAVAGLKSRS SSCHRGAKRP GLTHRSIPIL PRPGGSSHVP 
GSPLLVPTPV AMAGVPAASQ RVAPGRPGPR PRHVHRRVRG RHACGRGVRR RPLRGGIELR
DPVAGLLGGA ARADRGVLSA AVMPVRSSQR PPRPVTHRRG RSVRGSDRGQ ATAELAIGLP
SLFVVFFLAA WMLGAVAAQT RCADAARIGA RLAARGEPDS AVHTMVIQAA PVGSTVTLHR
GAGRLEVQVS VHVGGIGVSR LVPGIEVAAR AVTPVEATVD LPSDAPTGCP ARMVP