| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4277 |
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| Symbol | |
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| ID | 3907245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5105773 |
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| End bp | 5108406 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881604 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_483352 |
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| Protein GI | 86742952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.113216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CCCCTGGGCA CCCCACGCCC GGTCGTGGGC GGTTCGAGGA TTCCGCCCGC
GACCGTGTAC CGGGGCGCCC GTACGGGCCT GACGAACTCC GCTTCGGCGA CGTCGACCGG
CCTGAGCCTC GTCCCATCGC ATCATCGGCC CGCCGGCTGG GGTTCGTGGC CACGCGGCTG
CTCGGCGCCG GCGTGATCAG CGTGGTGGCG GGGGTGCTCG TCGGCATGCT GGCCCTGCCG
GTGGTGGGAG CGGCCGGACT GACCGTCAAG GGCGGCGCGG ACGACTTCCT CGACCTGCCG
GCCAACCTGA CGGTCCCCCC GCTGGCCCAG GCGTCGCGCG TCCTCGACGC GCGGGGGAAC
GTCCTCGCCG TGCTGCGCGG GGAGCAGGAC CGTGAGGTCG TGTCCTTGGG CCGGGTTCCG
CCGGTGATGC GTCAGGCGAT CATCGACATC GAGGATTCCC GGTTCTACGA GCACGACGGG
CTGGATTACA AGGGTCTCGT CCGGGCGTAT CTCACCAACC GGGAGAACGG CGAGGTCACC
CAGGGCGGCT CGACCCTGAC CCAGCAGTAC GTCAAGAACG TTCTTCTGAT GTCCGCGACG
ACGGCTGAGG CGAAGAAGGC CGCGACCGAG CAGACCGTCC AGCGCAAGCT TCGGGAGGCG
CGTTATGCGC TGTACCTCGA AGCCCATCTG AGCAAGGACG AGATTCTCGA GCGTTATCTC
AACATCGCCT ACTTCGGCGA TGGTGCGTAC GGGGTCCAGG TAGCCGCGCG GCACTACTTC
AACGTCGACG TCGACAAGCT CACCCTGCCG CAGGCCGCGC TGCTGGCCGG CCTGGTGAAA
AACCCGAACG CCTTCAACCC GGCGATACAT CCGCAGGCGG CACGGGAACG GCGCAACGTA
GTCCTCGACC GCATGTTCGA ACTTCATCAC ATCGACGCGG CGGCCTTTCA TCAGGCGCAC
GATGGCGAGG TGGTGCTCAA CCGGCAGCCC CACTCGGCCG ATCCCTGCGC CGACTCGACC
GCGCCGTTCT TCTGCGCCCT CGTGCGCCAG CGGCTGCTGA ACGACAGATC CTTCGCCCCG
ACGGAGGAGG ACGCGCGCAG ACTACTGTTC GAGGGCGGCC TCACGATCAG AACGACGCTG
GACCCGGTGG CGCAACAGGC GGCGCAGTCG GCCGCGACCG AGGTCATCCC GATCGGGAAC
CGGGTGGCGG CGAGCGTCGC GATGGTGCAG CCGAACACCG GCCAGGTGCT CGCCCTGGCG
ATCAACCGGG TCTACGGACC GACGGCGGAC GGACAGCCCG CCGCCCTGTC CACGGACTTC
GTCCACACCA AGGAGATTTA TCCCGTCGAC GAGGACTCGT TCTCCCCGGG ATCGACCTAC
AAGGTGTTCA CTCTGATCTC CGCGCTCGAA TCGGGACTAC CGCTTTCCAC GACGCTGCAC
GCCCCCCTCT GCTACCACTC GAACGTCTTC CCGAACCCGG ATCCCCAGGG CAAGAACTGC
TACGGAAACG CCGATCCCAG CGAGGACGGT TTCTACTCGT TGACGACCGC AACCTGGTCA
TCGGTCAACA CCTACTACAT CCAGCTCGCC GAGAAGCTGG GCGTGCTGAA GACGGCCGAG
GTGGCCCGCC GTATGGGCGT CACCTCGTGC CGGATCCGGC AGCACAACAA CAACGATCCC
GAATGCAGGG GGGTGGACGG GATCACCCGG GTCGACGGCT CCTCCATCCT CGGATCCAAC
GAGATCAGCA CCCTCGATCT GGCGACCGCC TACGCGACGT TGGCCGCGCG GGGCAGGAAG
TGCGACGCGC GGGCCGTGCT CGCGATCACC CAGCGGGTGG GCGGGACGGA CCGGCCGCTT
CCCTTCGACA CCGGCGCTCC CTGCCAGCAG GCGCTCGACC CGAAGATTGC GGACAAGGTC
AGCGCCGTGC TGCAGGGGGT TATCAACCAC GGGACGGCCA GCGGGAACGG GCAGATCGGC
CGGCCGGCCG CCGGCAAGAC CGGCACCGCG GAGGGGTTCA GCACCGCCTC CTTCGCGGGT
TACATCCCCC AGCTCGCCGC GGCGGTGACC CTCGCGGACC CGCGCGGACC GACGTCGCAT
CCCCTGATTA ATGTGAAGGG TCGCAACGTC TTCGGTGGCG GATATCCCGC CCAGGTGTGG
TCCCGCACGA TGATCCGGAC GATCGCCGGT CTCGGACTAC CGGTCGAACC GCTGCCGACC
CCGGACGACA CCCAACCCGA GGTGCCGACG AAGGCACTGC CGGACGTGGT CGGGCAGCCG
CAGCAGGTCG CCGAGCAGAC GCTCGTCCAG CTGGGCTTCC ATGTCAGGTC GCAGCCGGTC
CCGCATCCGG CGCCCCCCGG CACCGTCGTG GCGATGTCGC CCGCCCCGGG CAGCGAGGTC
TCGCTCAACA CCGAGGTCAC CCTGCAGATC TCCGGGGGGC TGACCGGCAC GGCCGTCCTG
CCGGGTGGAT CGACGCTACC CGGCTTCGGA GCGCTCGCCC AGCCGAATGA CGGCCAACCG
GCCGGGGGCG GCCAGCCGGG CACGGATCTG CGTCGGCAGC TGAACGCTTC AGGCGGCTCG
GGGCCGTTGG ACGGGACGGA TGGCCGGGGC CAGGGCGGGC GCCGGCGGCG CTGA
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| Protein sequence | MTTPPGHPTP GRGRFEDSAR DRVPGRPYGP DELRFGDVDR PEPRPIASSA RRLGFVATRL
LGAGVISVVA GVLVGMLALP VVGAAGLTVK GGADDFLDLP ANLTVPPLAQ ASRVLDARGN
VLAVLRGEQD REVVSLGRVP PVMRQAIIDI EDSRFYEHDG LDYKGLVRAY LTNRENGEVT
QGGSTLTQQY VKNVLLMSAT TAEAKKAATE QTVQRKLREA RYALYLEAHL SKDEILERYL
NIAYFGDGAY GVQVAARHYF NVDVDKLTLP QAALLAGLVK NPNAFNPAIH PQAARERRNV
VLDRMFELHH IDAAAFHQAH DGEVVLNRQP HSADPCADST APFFCALVRQ RLLNDRSFAP
TEEDARRLLF EGGLTIRTTL DPVAQQAAQS AATEVIPIGN RVAASVAMVQ PNTGQVLALA
INRVYGPTAD GQPAALSTDF VHTKEIYPVD EDSFSPGSTY KVFTLISALE SGLPLSTTLH
APLCYHSNVF PNPDPQGKNC YGNADPSEDG FYSLTTATWS SVNTYYIQLA EKLGVLKTAE
VARRMGVTSC RIRQHNNNDP ECRGVDGITR VDGSSILGSN EISTLDLATA YATLAARGRK
CDARAVLAIT QRVGGTDRPL PFDTGAPCQQ ALDPKIADKV SAVLQGVINH GTASGNGQIG
RPAAGKTGTA EGFSTASFAG YIPQLAAAVT LADPRGPTSH PLINVKGRNV FGGGYPAQVW
SRTMIRTIAG LGLPVEPLPT PDDTQPEVPT KALPDVVGQP QQVAEQTLVQ LGFHVRSQPV
PHPAPPGTVV AMSPAPGSEV SLNTEVTLQI SGGLTGTAVL PGGSTLPGFG ALAQPNDGQP
AGGGQPGTDL RRQLNASGGS GPLDGTDGRG QGGRRRR
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