Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4273 |
Symbol | |
ID | 3907240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5101068 |
End bp | 5102588 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881599 |
Product | putative plasmid replication initiator protein |
Protein accession | YP_483348 |
Protein GI | 86742948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.730737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCC CTGTGCTGGA TTCGGAGTTC CTGCGCGCGG CGATGCCTCG CGCTGCGGAC GGCTCCCTGT CCGGGTTTCT CGCGCAACTC GACCGGGTGT CCGGCTGCGC GCACCCTGTC CGCCTGTTCG GCCACATCGA CCATGTGGAT ACGGCTACCG GTGAGGTGCG CCGCGTGCTG GACACGGCGG ACATGCCGGA CGGGCTGCTC CTCGTGCCCT GCGGGAACCG GCGGGCCTCG GTGTGCCCGT CCTGCTCCTA CTTGTACGCG GGTGACGCCT GGCAGATCGT CCACTCCGGT CTGACCGGTG GCCATGATGT TCCCGCGACG GTGGCGGAGC ATCCGGGGCT GTTCGTCACG GTGACCGCAC CCTCGTTCGG CCCGGTGCAT TCCCGCCGGG CGAACCACGG TCCCGCTCAG GTCTGCAACC GGCGCCAAGG ACGATGCCCG CATGGCCGTG CGCGCGGCTG CGGCTTCGTC CACGGCGAGG ATGACTGGCG GCTCGGCACC CCGCTGTGCC CGGACTGCCA CGACGACGGC GCGCTGATCG TCTGGAACCG CACCTCGGGC AGGCTATGGA AGCGCACCGT GGACGCGACC TACCGGCGCA TGGCCACCGT CACGGGCATG ACCGAACGGG GCTTGCGGCG TGCGGTCCGC ATCTCCTACG TCAAGGTCGG GGAAGCCCAA CGGCGCGGCG CGGTCCACTT CCATGCCCTG CTGCGCCTGG ACGCGGGCAG CGACTCGGAC GTCTGGCAGG CTCCTCCCGC CTGGGCAACC GGGGACCTGC TGGCGTCCTG CTGGCGCTGG GCGGTCACCC ACACCGAGGA ACCCTGCCCG GACCCGCACG CCTATGACCT TCCCTCCGAA GCGGACGCGC TCGCCACCCT GGCGGCTGCG GGCCTGCTCG CCTCCGCGGA CATCCCCCCA CCTGCGCCAC GCCCGGCACC CATGCGGGCG GCTCGCTGGG GTGAGCAGCA TGATGTGAAA AAGGTGTTGG TGGACGGCGG GGACCTGACC CCGCAAGCGG TCGGGAACTA CCTCGCCAAG TACATCACCA AGTCCGTCGT GGACTCCGGC CTCCTCGACC GGCGTATCCG CGACGCTGAC GACTTGGAGG CACGCCTTCC GTTCCTGGGA GAGTTCCACG CCCGGCTGGT CCATACCGCG TGGCGTCTCG GTCCGCACCC GGAGTTTCAG GATCTACGGC TGCGCCAATG GGCGCACCAA CTCGGCTTCA ACGGCCATTG GCTCACCAAA TCACGCGGCT ACTCCACCAC CTTCGCGGCA CGCCGGACGG CCCGGCGTAC CTGGCGGCGC ACCCACGTGA ACGGCGAGGA ACGCCCGGCC CTCGACGCCT TCGGCCGACC CGACGACACC GACGAAACAG TGATCATCCC CACCTGGCGG TACCACTCCT CCGGCTACAC CAACAACGGC GACCGATGGC TCGCATCCAT GGCCGCAGAC CAAGCCCGGT CACGGAGAGA GGTTACCCGT GATCATCGTT CGGCGGCGTG A
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Protein sequence | MTVPVLDSEF LRAAMPRAAD GSLSGFLAQL DRVSGCAHPV RLFGHIDHVD TATGEVRRVL DTADMPDGLL LVPCGNRRAS VCPSCSYLYA GDAWQIVHSG LTGGHDVPAT VAEHPGLFVT VTAPSFGPVH SRRANHGPAQ VCNRRQGRCP HGRARGCGFV HGEDDWRLGT PLCPDCHDDG ALIVWNRTSG RLWKRTVDAT YRRMATVTGM TERGLRRAVR ISYVKVGEAQ RRGAVHFHAL LRLDAGSDSD VWQAPPAWAT GDLLASCWRW AVTHTEEPCP DPHAYDLPSE ADALATLAAA GLLASADIPP PAPRPAPMRA ARWGEQHDVK KVLVDGGDLT PQAVGNYLAK YITKSVVDSG LLDRRIRDAD DLEARLPFLG EFHARLVHTA WRLGPHPEFQ DLRLRQWAHQ LGFNGHWLTK SRGYSTTFAA RRTARRTWRR THVNGEERPA LDAFGRPDDT DETVIIPTWR YHSSGYTNNG DRWLASMAAD QARSRREVTR DHRSAA
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