Gene Francci3_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4265 
Symbol 
ID3907232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5087405 
End bp5088514 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID637881591 
Productperiplasmic phosphate binding protein 
Protein accessionYP_483340 
Protein GI86742940 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGAG GCAAGCGTCA GGCCGCCATC GGGGCTGCAA TGGTGGCACT GCTCACTGTG 
GCGGCGTGTG GCACCGACGA CAACAGTGAC TCCGGCGGCA CCGCGGCGAA GCCGTCGAAC
GGGGCGAGCG CGATCGCCTG CGAGAAGGGC TCCATTACCG GATCGGGTTC CTCCGCGCAG
AAGAACGCGA TGGACGAATG GGTCAAGGCG TACCAGAACG CCTGCGACGG AGCAAAGATC
AACTATCAGT CGACGGGGTC CTCGACCGGT CGGCAGCAGT TCGTCGCCAA GCAGGTTTCC
TTCGCCGGTT CCGACTCGGC GCTGAAGGAC CAGCAGAAGA CCGACGCGGA CAAGCGCTGT
ACCCCCGGTA CGGCTGTCGA CCTGCCGATG GTGGTCGGCC CGGTGGCGCT TATATACCAC
CTCTCGGGTG TCGACAAGCT CCAGCTGTCT GCCCCGACGA TAGCGAAGAT CTTCTCCGGC
GCCATCACCA AGTGGAACGA CCCGGCGATC ACCGCGGAGA ACAGCGGGGT TACTCTGCCT
GACGCGCCGA TTGCCTCGGT GCACCGGTCC GACGGTTCCG GCACCACCGA CAACTTCACC
AAGTTCCTGA AGGGCGCGGC CGGCGCCGCT TGGACCTTCG ACTCCGGCTC GGACTGGAAG
GCCCCGGGCG GCCAGGGTGC CAAGGGCAGC GACGGGGTGA CTGCGACCGT GAAGTCCACC
GAGAACTCGA TCGGTTATAC GGAGCTCTCC TACGCGGAGA ACGCCGGGCT GTCCACGGTC
GCGGTCAAGA ACGGTGCCGG AGAGTACGTC AAGGCGAGCA CGGATGGTGC CTCCCTCGGC
CTGAGCACCG CGAAGGTTGC CAGCGGTGAC GATCTGAAGC TCACCTTCGA CTACACCGCG
GCGACCAAGG GGGCCTACCC GATCTACTTG GTCACCTACG AGATCGCCTG CACCACGGGT
CTCCCGGCCG ACCAGGCCAA GCTGGTCAAG TCCTTCCTGA CTTACACCGC GTCGGACGCG
GGCCAGTCCT CGATCGCCGA CCTTGGTTAC GCGCCGCTGC CGGACTCGGT AGCGACTCGG
GTCCGCGCGG TGGTTGACAA GCTGTCCTGA
 
Protein sequence
MNRGKRQAAI GAAMVALLTV AACGTDDNSD SGGTAAKPSN GASAIACEKG SITGSGSSAQ 
KNAMDEWVKA YQNACDGAKI NYQSTGSSTG RQQFVAKQVS FAGSDSALKD QQKTDADKRC
TPGTAVDLPM VVGPVALIYH LSGVDKLQLS APTIAKIFSG AITKWNDPAI TAENSGVTLP
DAPIASVHRS DGSGTTDNFT KFLKGAAGAA WTFDSGSDWK APGGQGAKGS DGVTATVKST
ENSIGYTELS YAENAGLSTV AVKNGAGEYV KASTDGASLG LSTAKVASGD DLKLTFDYTA
ATKGAYPIYL VTYEIACTTG LPADQAKLVK SFLTYTASDA GQSSIADLGY APLPDSVATR
VRAVVDKLS