| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4262 |
|---|
| Symbol | |
|---|
| ID | 3907229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5084167 |
|---|
| End bp | 5084943 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637881588 |
|---|
| Product | phosphate transporter ATP-binding protein |
|---|
| Protein accession | YP_483337 |
|---|
| Protein GI | 86742937 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC GCATCGACGT TTCCGGGCTG ACGGCGTACT ATGGGAAGTT CAAAGCCGTA
GCCGACGTGA ACCTGACCAT CGAGCCGAAG AACGTCACCG CATTCATCGG GCCGTCCGGA
TGCGGAAAGT CGACGGTGCT GCGCACGCTC AACCGGATGC ACGAGGTGCT TCCGGGGGCC
CGGGTCGAGG GGCAGGTACT CCTCGACGGT GAGGATCTGT ACGGGCCCGG GATGGACCCG
GTGGCCGTCC GCCGCACCGT CGGGATGGTC TTCCAGCGAC CGAACCCGTT CCCGACCATG
TCCATCTACG AGAACGTCAT CGCCGGGCTC AAGCTGAACG GGGTCCGCAA GAAGGCGCTC
CTCGACGAGC GGGTCGAGGA GTCACTGCGG GGCGCGAACC TCTGGGAGGA GGTCAAGGAC
CGGCTGGGCC GGCCGGGCGC GGGCCTGTCC GGCGGGCAGC AGCAGCGGCT CTGCATTGCC
CGGGCGATCG CGGTGGAGCC GCAGGTCCTG CTGATGGACG AGCCGTGCTC CGCGCTCGAC
CCGATCTCCA CTCTTGCGAT CGAGGATCTG ATCGCGAAGT TGAAGTCGAG CTTCACCATC
GTCATCGTCA CCCACAACAT GCAGCAGGCG TCGCGGGTCA GCGACTCGAC CGCCTTCTTC
TCGTTGGAGA AGACCGGCGA CCCCGGCCGC CTCGTCGAGT ACGACAAGAC CTCGCAGATC
TTCAGCAACC CCAAGGAAAA GCGGACCGAG GACTACATCT CCGGACGGTT CGGCTGA
|
|---|
| Protein sequence | MATRIDVSGL TAYYGKFKAV ADVNLTIEPK NVTAFIGPSG CGKSTVLRTL NRMHEVLPGA
RVEGQVLLDG EDLYGPGMDP VAVRRTVGMV FQRPNPFPTM SIYENVIAGL KLNGVRKKAL
LDERVEESLR GANLWEEVKD RLGRPGAGLS GGQQQRLCIA RAIAVEPQVL LMDEPCSALD
PISTLAIEDL IAKLKSSFTI VIVTHNMQQA SRVSDSTAFF SLEKTGDPGR LVEYDKTSQI
FSNPKEKRTE DYISGRFG
|
|---|
| |