Gene Francci3_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4255 
Symbol 
ID3907222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5077354 
End bp5077836 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID637881581 
ProductCarD family transcriptional regulator 
Protein accessionYP_483330 
Protein GI86742930 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCC AAGTCGGCGA GACCGTTGTT TACCCGCATC ATGGTGCTGC TCTGATTGAC 
GCGATTGAAA CTCGCGTCAT CAAGGGCGAG GAAAAACTCT ATCTCGTGCT GAAGGTCGCT
CAGGGCGATC TGACTGTCCG AGTTCCGGCC GACAACGTCG GCATGGTCGG GGTGCGTGAC
GTCGTCGGGC AGGACGGGCT GGAACGGGTG TTCGAGGTGC TCCGCGCCCC GCACACCGAG
GAGCCCACCA ACTGGTCACG ACGGTACAAG GCAAATCTTG AGAAGCTCGC CTCCGGCGAT
GTGAACAAGG TGGCTGAAGT CGTCCGTGAC CTGTGGCGAC GCGATCGCGA ACGCGGTCTT
TCCGCGGGCG AGAAGCGAAT GTTGAGCAAG GCCCGGCAAA TCCTCGTCAG CGAGCTTGCG
CTCGCCGAGG GCACCAACGA GGACAAGGCG GAGGCCATGC TCGACGAGGT TCTCGCCGGA
TGA
 
Protein sequence
MAFQVGETVV YPHHGAALID AIETRVIKGE EKLYLVLKVA QGDLTVRVPA DNVGMVGVRD 
VVGQDGLERV FEVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDRERGL
SAGEKRMLSK ARQILVSELA LAEGTNEDKA EAMLDEVLAG