Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4255 |
Symbol | |
ID | 3907222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5077354 |
End bp | 5077836 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637881581 |
Product | CarD family transcriptional regulator |
Protein accession | YP_483330 |
Protein GI | 86742930 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCC AAGTCGGCGA GACCGTTGTT TACCCGCATC ATGGTGCTGC TCTGATTGAC GCGATTGAAA CTCGCGTCAT CAAGGGCGAG GAAAAACTCT ATCTCGTGCT GAAGGTCGCT CAGGGCGATC TGACTGTCCG AGTTCCGGCC GACAACGTCG GCATGGTCGG GGTGCGTGAC GTCGTCGGGC AGGACGGGCT GGAACGGGTG TTCGAGGTGC TCCGCGCCCC GCACACCGAG GAGCCCACCA ACTGGTCACG ACGGTACAAG GCAAATCTTG AGAAGCTCGC CTCCGGCGAT GTGAACAAGG TGGCTGAAGT CGTCCGTGAC CTGTGGCGAC GCGATCGCGA ACGCGGTCTT TCCGCGGGCG AGAAGCGAAT GTTGAGCAAG GCCCGGCAAA TCCTCGTCAG CGAGCTTGCG CTCGCCGAGG GCACCAACGA GGACAAGGCG GAGGCCATGC TCGACGAGGT TCTCGCCGGA TGA
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Protein sequence | MAFQVGETVV YPHHGAALID AIETRVIKGE EKLYLVLKVA QGDLTVRVPA DNVGMVGVRD VVGQDGLERV FEVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDRERGL SAGEKRMLSK ARQILVSELA LAEGTNEDKA EAMLDEVLAG
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