Gene Francci3_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4248 
Symbol 
ID3907215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5070082 
End bp5071395 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content73% 
IMG OID637881574 
Productprotein serine/threonine phosphatases 
Protein accessionYP_483323 
Protein GI86742923 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGATG ACCAGCTCGA CGAGTGCGAC CACTTCGGTC GATCATCGGG CGCGCGCCGT 
CGGTGTCCCG AGACGGCCAC GGCGAGCATC GACGACCCGA TCGTCAGGGG CAGGAGGCAC
CCAGCACATG GCTCTGCGCA CACCGCCCGC ATGCGTTCTC CCGGCTGTTT CCGGCCGCGT
CCGATTTCTC CCGGCGGCAT GACGGTGGAC CTCAACCCGC ATGACGACGC CCCCACGGTC
GCCTACCAGA TCACCGGGAG CGGGCCGTTC GAACTCGACG ACGACCTGGG TCGCTGCCCG
GTGTGCGCGG CACCGGTGTA TGCCGACGAC CGGTACTGCG AGGTCTGTGG TCACGGGCTG
GAGGGTCCGC ACCCCGGCCA CGGCGACGCC GACCACAGCG AGGTCGACCT CGGCCAGCTC
GCCGGCGTGT GCGACCGCGG CGTCCGGCAC ACCACCAACG AGGACGCCAT GGGCCTGGCC
GTCGTGTACG GCACGCTGAT CGCGGTGGTG TGTGACGGCG TATCGACCAC TCCGGGCTCC
GGGCAGGCCT CGGCCGCCGC GGCGGCCGCG GCCATGGCCG TCCTCGCGGA TGCGGTGCGT
GCCCACGGCC CGGGGCGCCC CGTCCACCAC GGCACCCGCC CGTCGCGCGG CGTCAGCCGG
GCCGAGGAGA TGCTCGACAT CCTCGAACCG TCGTATGCCG ACTACAAGAA GCCGCGAACA
TCGCCCCGCG CGGTTGTCGG CGGGTTCTCC CCGGAGGACG CCGAGGCCGC GCTGCACGCC
GCCGTCGACG CGGCCCAGGC GACCATCGCC CAACTCAGCG CGGCCGAGGG GCGGATGGCG
CCGTCGTGCA CGTTCGCCGC GGCCATCGTC ACCCCGCCGA CCCCGGACGG GCCGGGCATG
GTCACAGTCG GCTGGGTCGG CGACAGCCGG GTCTACCTGC TCGGTCCGCG CTGGTGCGAG
CGGCTGACCG CCGACGACAC CTGGGCGGCC GAGGCCGCGC GCGCGGGGCT CATCCCGGCC
AACGAGGCCG AGACGCACCG GCGGGCGCAC ACCCTCACCC GCTGGCTGGG CGGCGACGTC
GAGGACGTCG CGCCGCACAC CGAGATGTTC CCGATCGAGG CGCCGGCCAC GGTACTGGTT
TGCAGCGACG GGCTGTGGAA CTACGCGTCC CGGCCAGACG TGATGGCCGC GCTCGTCAAC
CAGCTCCCAC CCCACTGCGA GGCCATCGAC GTCGCCCGCC ACCTCGTCGA CTTCGCCATC
AACTCCGGGG GACACGACAA CATCACGGTG GTGGCCGCCC GGGTGGAGGA CTGA
 
Protein sequence
MCDDQLDECD HFGRSSGARR RCPETATASI DDPIVRGRRH PAHGSAHTAR MRSPGCFRPR 
PISPGGMTVD LNPHDDAPTV AYQITGSGPF ELDDDLGRCP VCAAPVYADD RYCEVCGHGL
EGPHPGHGDA DHSEVDLGQL AGVCDRGVRH TTNEDAMGLA VVYGTLIAVV CDGVSTTPGS
GQASAAAAAA AMAVLADAVR AHGPGRPVHH GTRPSRGVSR AEEMLDILEP SYADYKKPRT
SPRAVVGGFS PEDAEAALHA AVDAAQATIA QLSAAEGRMA PSCTFAAAIV TPPTPDGPGM
VTVGWVGDSR VYLLGPRWCE RLTADDTWAA EAARAGLIPA NEAETHRRAH TLTRWLGGDV
EDVAPHTEMF PIEAPATVLV CSDGLWNYAS RPDVMAALVN QLPPHCEAID VARHLVDFAI
NSGGHDNITV VAARVED