Gene Francci3_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4245 
Symbol 
ID3907212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5067612 
End bp5067992 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content69% 
IMG OID637881571 
Producttransglycosylase-like 
Protein accessionYP_483320 
Protein GI86742920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.91543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG CTCGTTCGCT CGCTCGTGGT CTCAACCGCA TCAGGCTCGG TTCCCGGGCC 
TTGATCGCCG CCACCACTCT CGCGGCCTCG ATCGGCGGTG GCCTCGCGCT GTCCCAACCG
GCCAGCGCGT CGACGAACGC CGACCACTTC CTCTCCAAGG TGATCCCTTG TGAGTCCGGG
GGGAACCCCC GCGCGGTCAA CTCCATCGGC GCCGGCGGGT TGTTCCAGTT TCTGCCCAGC
ACCTGGCACG GGGTCGGCGG CAAGGGTCTG CCGCAGCACG CCAGCGTCGC CGAGCAGTGG
CAGCGCGCCC GCATCCTGTA CGCCCAGCAG GGGACGAGCC CCTGGTACGC CTCGAAGCCG
TGCTGGGGTC ACAAGATCTG A
 
Protein sequence
MSNARSLARG LNRIRLGSRA LIAATTLAAS IGGGLALSQP ASASTNADHF LSKVIPCESG 
GNPRAVNSIG AGGLFQFLPS TWHGVGGKGL PQHASVAEQW QRARILYAQQ GTSPWYASKP
CWGHKI