| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4243 |
|---|
| Symbol | |
|---|
| ID | 3907209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5062978 |
|---|
| End bp | 5064399 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881569 |
|---|
| Product | lipase, putative |
|---|
| Protein accession | YP_483318 |
|---|
| Protein GI | 86742918 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.48059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCGGT GCGTGGCCGT CGGATATCCC GAGGGAAAGG GACGTCGAGT GGCTCGCCGC
CGTTACTTCC ACCTGCTGAG CGCGCTTGCC ATCGCCGGAC TGGCGGTCGC CTGTTCCGGC
GCTGGTGGCA CGGAGTCCGG CGCGGGACGC TCCCCGGCGC TCGCGCGGGA GCTGGCGGAG
GCCGCGGTCG CCGCCCCGGA CGCCTCTCGC CTCCCGATCC TGTTCGTGCA CGGCAGCCTT
GGGTCGGGCA GCCTCTTCGA GACACCGGCG CAACGATTCA CCGCAAACGG CTATCCCGTC
GACTACGTCG AGGCCTTCGA CTACGATGCG TCGTCCTCGG CCAACTCCGT CGAGGAGGTC
CTTCCGGACC TCGATGCGAA GATCGCTAGT ATCCTCAAGG CAACCGGGGC GAAGAAGCTC
GATCTGGTGG CACATCTCGA GGGCGCCGCG CTAAGCGAGC GGTACCTGAC CAGCTCATCC
GACCGGGCGA ACCGGGTCGC GCACTACGTC ACCGTCGGAG GCTCGCTCGC GGGTAGACCC
CCGGCCGGAG TGCCCACCCT GGCGGTCTGG GGCGAGAACG ATCCGACCCG GCGCGTCGAG
GGGGCCGTCA ACGTGCGGTT CGTCGACCAG GACCGCGCCC AGCTCCTGAC CTCGACGGCC
ACCTTCAGGG AGATGTACCG GTTTCTCACC GGAACCACTC CGCACACGAC CGACGTGGTG
CCGAAGCAGG GCCCGATCGA GATCTCCGGC CGGGCCCTGC GCTATCCGAT GAATGTCGGT
GTGCGGGACG CCAGGCTGGA GGTTCACCGG GTCGACCCAC GGACGGGTCG GCGGGGGGCG
AACAGCCTCA AAGGTTATTT CCACCTCTCC GGCGACGGAT CCTGGGGTCC GTTCCGAGGT
GACGGCGCCT CCACCTACGA GTTCGTGATC GTACGCGGCG GGGAACCCGA CCACCACTTC
TACTACCAGC CGTTCCGCCG CGACGATCAC CTCGTACGTC TGCTGACGAG CCAGCCGGGC
CAGGAGATCG GCGGCGGGAT GGAGACCGGT CCCGGGCACA CCGATCTGGT CGTCGAACGC
CCGCTCGAAT GGTGGGGGGA CCAGGGGAAC GCCGACGACG TCCTCAGCAT CGACGGGAAG
AACGTGCTGA ACGCCGCCGA CGCGCCCCGG TCCAAACTGG CCCTGGGCGT CTACCTGTTC
GACCGGAATT CCGACGGCGT CACCCACCTC ACAATGCCGA TTCCGGCGTA TTTCGGGATC
GGCTTCATCA CCGGCGTAGA TGTGTTCATC CCGGCGGGTG AGCGCTCGGT CGAAGTCGCG
ATGACGCCGC GGGGAAAGAC AGCCCACCGG AGCGTTCTCC AGGTGCCCGC CTGGCCGTCG
GACCGGCATC GCGTCACTCT GCACTTCACC GGCGAGGGCT GA
|
|---|
| Protein sequence | MARCVAVGYP EGKGRRVARR RYFHLLSALA IAGLAVACSG AGGTESGAGR SPALARELAE
AAVAAPDASR LPILFVHGSL GSGSLFETPA QRFTANGYPV DYVEAFDYDA SSSANSVEEV
LPDLDAKIAS ILKATGAKKL DLVAHLEGAA LSERYLTSSS DRANRVAHYV TVGGSLAGRP
PAGVPTLAVW GENDPTRRVE GAVNVRFVDQ DRAQLLTSTA TFREMYRFLT GTTPHTTDVV
PKQGPIEISG RALRYPMNVG VRDARLEVHR VDPRTGRRGA NSLKGYFHLS GDGSWGPFRG
DGASTYEFVI VRGGEPDHHF YYQPFRRDDH LVRLLTSQPG QEIGGGMETG PGHTDLVVER
PLEWWGDQGN ADDVLSIDGK NVLNAADAPR SKLALGVYLF DRNSDGVTHL TMPIPAYFGI
GFITGVDVFI PAGERSVEVA MTPRGKTAHR SVLQVPAWPS DRHRVTLHFT GEG
|
|---|
| |