| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4238 |
|---|
| Symbol | |
|---|
| ID | 3907204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5056217 |
|---|
| End bp | 5057479 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637881564 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_483313 |
|---|
| Protein GI | 86742913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.375023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG TCGCGCTCCC GGTGCTGCTT TTCCAGCGCA CCGGGAGCGG CACGCTCGCG
GGCGTGCTGG TCGGTCTCGA AGCGGTGCCC TACCTCGTGC TCGGACTGCC CGCTGGTGCC
CTGGTCGACC GCTGGGATCA CCGGCGCACG ATGGTGGTCA CCAGTTGCCT CAGCGGCCTG
ACGATGGCCA GCATCCCCGT GGCCAACTGG GCGGGTGTCC TCACCACACC CCATCTGCTG
ATCTCCGCGG TGCTTGTCGC ATCGGTCTTC GTGTTCTTCG ATGCGGCCAG CTTCGGCGCA
GTCCCGGCGA TCGTGGGACG GGACGCGGTG GCCGCGGCGA CCGGGGCGAT GGTGTCGGTG
AGCACCGTTG TCAACCTGGT CGGGCCGGCC GTCGGCGGGG TGGCCGCGGC CACGGTGGGC
GCAGCCAGTG TGCTCGCCCT CGATGCGCTC AGCTACCTGG TCGGTGCCAT CCTGCTCTCC
CGGGCGCGCT GGGCCGTGCC GGCCGCAGCC GACCGGAGCA GGGCCGACCG GAGCGGGCCG
GCTGGCAGCC GGGTGAGCCG GACCCGTCGC GACATCGCCG AGGGCCTGGG TTACATCCGG
GGGCATCGCC TCATCCGGAC TCTGACCCTG CTCGGGGCCG GCAGCAGCCT GTCCGGGGGC
GCGGTCACCG GCCTGGTCGT CGTCGTCGCG GTACGGCAGT TCGGCCTTCC CGACGACGAC
CCGCGGATCG GTCTCCTCTA CGTCGCCGCC GCGCTCGGAA CGCTGATCGT CAGCCAGCTG
CTCAGCCGCG TGCACCGACA CGTCCCCACC GGAACGATCA CACTCGGTGC GCTCGGAGCC
AGCACGCTCG CCCTGATCGG CTGGTCTCTG AACACGGCGT GGCTGCCAGG GATGGGCATC
CTGCTGCTCT GGCAGGCCAG CACCTCCCTG GTCATCCTAA ACGGCATCGT CGTCCGGCAA
GCCGTCACCC CCCTACGCCT GCAGGCCCGG GTCAACACCA CCGCGAGGAT GATCGCCTGG
GGCGGAACGC CGCTGGGTGC CGTGCTCGCC GGCATCCTCG CCGATGCCTG GGGCACCCGG
GCCGCTCTGC TGACCGCCTC GGCCGGCGTC GGCCTGGCGC TGGTAGCGGG CCTGATGGCA
GGCCTCGGCC ACACCGGCAG GCTTCAGGAC CTGATCAGGG CCGACGAGGC ACCGGCCAAC
CCGCCGCAGG CCGGGCCCGG TGGGCCGGAC GCCGCGGTCC GGGCGGTGAC AGCCGCCGAA
TGA
|
|---|
| Protein sequence | MTLVALPVLL FQRTGSGTLA GVLVGLEAVP YLVLGLPAGA LVDRWDHRRT MVVTSCLSGL
TMASIPVANW AGVLTTPHLL ISAVLVASVF VFFDAASFGA VPAIVGRDAV AAATGAMVSV
STVVNLVGPA VGGVAAATVG AASVLALDAL SYLVGAILLS RARWAVPAAA DRSRADRSGP
AGSRVSRTRR DIAEGLGYIR GHRLIRTLTL LGAGSSLSGG AVTGLVVVVA VRQFGLPDDD
PRIGLLYVAA ALGTLIVSQL LSRVHRHVPT GTITLGALGA STLALIGWSL NTAWLPGMGI
LLLWQASTSL VILNGIVVRQ AVTPLRLQAR VNTTARMIAW GGTPLGAVLA GILADAWGTR
AALLTASAGV GLALVAGLMA GLGHTGRLQD LIRADEAPAN PPQAGPGGPD AAVRAVTAAE
|
|---|
| |