Gene Francci3_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4228 
Symbol 
ID3907194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5043485 
End bp5044075 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID637881554 
Producthemerythrin HHE cation binding region 
Protein accessionYP_483303 
Protein GI86742903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA ATGACGCTGG GTTCGACGGC GGCCGAGCGG CGCAGTTCTC CCACGACGAC 
GTCGTGGGAG TCCTGCTCGA ACAGCACGCC CGCATCCGCG AGCTGTTCGC GGACGTGAAG
TCGGCGGCGG GCGAGCACAA GCGCCGGGCG TTCGACGAGC TGCGGGCGTT GCTCGCCGCG
CACGAGACCG CCGAGGAGAT GGTCGTGCGG CCGGTTACGA AGAAGATCGA CAGCCGGGTG
GCCGAGGCGC GCAACCACGA GGAGGACGAG GCCACCCGCG TGCTGCTGGC GCTGGAGAAG
ATGGATGTCG GTAGCGCCGA GTTCGATGCG AAGCTGGCGG ACTTCGAACG GGCCGTTGTC
GACCATGCCG AGCATGAGGA AAACGAGGAG TTCCCCCGGG TGCACGCGGC CCGCGACGCC
AGGCAGCTGG AAAGCATGGG CCGTCGGCTT CGGACGGCGG AGAAGTTCGC TCCCACCCAT
CCGCACCCGT CAGCCGCCGG TTCGACCGCC AAGCAGTGGA CGGTAGGTCC GATCGCCTCG
GTCATCGACC ATGTCCGGGA TGCCGTGACG CGGCGGGGTG CCGTGGACTG A
 
Protein sequence
MPINDAGFDG GRAAQFSHDD VVGVLLEQHA RIRELFADVK SAAGEHKRRA FDELRALLAA 
HETAEEMVVR PVTKKIDSRV AEARNHEEDE ATRVLLALEK MDVGSAEFDA KLADFERAVV
DHAEHEENEE FPRVHAARDA RQLESMGRRL RTAEKFAPTH PHPSAAGSTA KQWTVGPIAS
VIDHVRDAVT RRGAVD