Gene Francci3_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4216 
Symbol 
ID3907181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5032806 
End bp5034080 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID637881543 
Producttransposase IS116/IS110/IS902 
Protein accessionYP_483292 
Protein GI86742892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTCC TGGAGGCTGC CGGACCTGGT GCCGAGAGAC GGGAGACCCG GATGCTGTTC 
GTCGGTGACG ACTGGGCGCA GGACCACCAC GATGTGGAGG TGCAGGACGA GACGGGTCGG
CGACTGGCGA AGGGCCGGCT GCCGGAGGGC GTGGCCGGGA TCGCCCGGCT GCACGCGCTG
ATCGGGCGGC ACCTGGCCGA GGACGCCGGC CCGGAGCAGG TCGTGGTCGG GATCGAGACC
GACCGCGGCC CGTGGGTGCG GGCGCTCGTC GCGGCGGGCT ACCAGGTGAT CGCGGTGAAC
CCGTTGCAGG CGGCGCGGTA CCGGGAGCGG TACTCGACGT CGGGTGCCAA GAGCGACGCC
GGCGACGCGC ACAGCCTGGC GGACATGGTC CGTACGGACC GTCACCAGCT GCGGCCGGTC
GCTGGGGACA GTGACACCGC CGAGGCGGTG AAGATCGTGG CGCGGGCGCA TCAGAACCTG
ATCTGGGACC GGACCCGCCA GACCCAGCGG CTGCGCTCGG CGCTCCTGGA GTTCTTCCCG
GCCGCGCTGG CCGCGTTCGA CGACCTCGAT ACCCCTGACG CGCTGGAGCT TCTCGCGAAG
GCGCCGTCGC CGGCCGAGGC CGCGAGGCTG ACCGTTGCGC AGATCAGCGC CGCGCTCAGG
CACGCCCGCC GGCGGAAGAT CCCCGAGAGG GCGGCCGCGA TCCGGGCGGC GCTGCGGGCC
GAGCAGCTGC CCGTCACGCC GGCGGCGACC ACCGCCTACG CCGCGGTCGT GCGCGCCCAG
GCCGGGCTGC TCGCAGCCCT CAACGGCGAG ATCGCCCGGC TCGAGGAGCA GGTCGCGGAC
CATTTTGACC AGCACCCGGA CGCGAAGATC CTGCTGTCCC AGCCCGGCCT GGGACCGGTC
CTCGCGGCCC GGGTGCTCGC CGAGTTCGGT GACGACCCGA CGCGCTACGC CGACGCGAAG
GCACGGAAGA ACTACGCCGG CACGAGCCCG ATCACCCGCG CCTCCGGGAA GAAGAAGACG
GTCCTGGCCC GCTACGCACG CAACAACCGG CTCGCCGACG CGCTACATCA GCAGGCGCTC
TCGGCCCTGA GCGCATCCCC GGGCGCCCGG TCGTACTACG ACGCGATCCG CGCGCGCGGC
ACGTCGCACC ACGCCGCGCT GCGCCAGCTC GGCAACCGGC TCGTCGGAAT CCTGCACGGC
TGCCTCAAGA CCCACACCCC CTACAGTGAG GCAACCGCAT GGACACAGAA AGCAACACTC
GACGTCGCCG CTTGA
 
Protein sequence
MDLLEAAGPG AERRETRMLF VGDDWAQDHH DVEVQDETGR RLAKGRLPEG VAGIARLHAL 
IGRHLAEDAG PEQVVVGIET DRGPWVRALV AAGYQVIAVN PLQAARYRER YSTSGAKSDA
GDAHSLADMV RTDRHQLRPV AGDSDTAEAV KIVARAHQNL IWDRTRQTQR LRSALLEFFP
AALAAFDDLD TPDALELLAK APSPAEAARL TVAQISAALR HARRRKIPER AAAIRAALRA
EQLPVTPAAT TAYAAVVRAQ AGLLAALNGE IARLEEQVAD HFDQHPDAKI LLSQPGLGPV
LAARVLAEFG DDPTRYADAK ARKNYAGTSP ITRASGKKKT VLARYARNNR LADALHQQAL
SALSASPGAR SYYDAIRARG TSHHAALRQL GNRLVGILHG CLKTHTPYSE ATAWTQKATL
DVAA