Gene Francci3_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4211 
Symbol 
ID3907176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5027998 
End bp5028930 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID637881538 
Producttransposase, IS4 
Protein accessionYP_483287 
Protein GI86742887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATC GTGTCGACTC GTACCCAGCG GATCACGGAC ATTCGGGATC AAGCCTCAGC 
AGAGACCACG CTCCGTCACC ACCGAATCTG CGACAGAGCC GACCATTGGA CAGGCTCCTG
CGCGGCGCCG CCGGCCCGGA CGGGAAGACC CCGCACCTGC TCGCAGCGGT CACCCACGCC
ACCGGCGCGG TGCTCGCCGA GCACCAGATC GGCGCGAAGA CCAACGAGGT TCCCGCGTTC
GTCCCGCTGC TGCGCGAGCT GCACACCTAC CACCCGCCGA CCGGCCACGT GATCACCGCT
GATGCCGCCC ACACCAACCG CGCCCACGCC GAGGCGATCG TCACCGAGCT CGGCGCGCAC
TTCGTGTTCA CCGTCAAGAA CAACACCCCC GCCCTGGCCG TCGACTGCCA CCAGGTGACC
GACTGGACGA AGGCCCCGAT CGGCCACACC ACCGAGGGAA AGGCCCACGG CCGGCTCGAG
AAGCGCACCA TCCAGCTCGC CGAGGCCAGC GAGGCGATCC GCGCCCGCCA CCCGCACGCC
CGCACCGTCG CCCGGATCCG CCGCCGGACC ACCCGCACCG TCACCCGCGG CACCCCCCGG
CGCCGCGTCA CCCGCAGGAC CACCACCACA ACCACCGTCC ACGTCATCAC CAGCCTCGCC
CCCGGCGAGG TCACCGCCGC CGAACTCGCC ACCTACGTCC GGGACCACTG GACTGTGGAG
AACCGCGTCC ACCGGGTCCG CGATGTGACG TTCCGTGAGG ACGCCTCCCG CGTCCGGACC
GGCCCCCCGC CCCGCGTACT GGCCACGTTC CGTAACCTTG CCATCGGCCT GCTCCGCCAG
GCCGGACACC CCCGGATCAG CCCCACCCCG CGCCGCCTCC GCCACGACCC AGCCCTGCTC
ACAGCCATCC TCGGCCTCGA AAACCCGGCC TGA
 
Protein sequence
MTHRVDSYPA DHGHSGSSLS RDHAPSPPNL RQSRPLDRLL RGAAGPDGKT PHLLAAVTHA 
TGAVLAEHQI GAKTNEVPAF VPLLRELHTY HPPTGHVITA DAAHTNRAHA EAIVTELGAH
FVFTVKNNTP ALAVDCHQVT DWTKAPIGHT TEGKAHGRLE KRTIQLAEAS EAIRARHPHA
RTVARIRRRT TRTVTRGTPR RRVTRRTTTT TTVHVITSLA PGEVTAAELA TYVRDHWTVE
NRVHRVRDVT FREDASRVRT GPPPRVLATF RNLAIGLLRQ AGHPRISPTP RRLRHDPALL
TAILGLENPA