Gene Francci3_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4201 
Symbol 
ID3907166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5015671 
End bp5016588 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content71% 
IMG OID637881529 
ProductABC transporter related 
Protein accessionYP_483278 
Protein GI86742878 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACC AGCCGCTGGC TGTGCCAGCG CGGACCCCCG CGCCGCAGGC CGCCGAGGTG 
GTCGCTCGGG CCGTTGGCGT CACCCGGTGC TACGGCGGCA CGACGGCCCT CGACGGCCTC
GACCTCGAGG TGCGGGCCGG CGAGCTGGTG GGCCTTCTGG GGCCCAACGG AGCGGGCAAG
TCCACCCTGA TCCACGTCCT CACCGGTCTG CGTCGCCCGA ACCGGGGTCG TTGTGAACTG
TTCGGGCGGG ATCCTCGGAC CCCGGCGGGC CGGCGGTACA TCGGAGTCAC CCCGCAGGAG
ACCGGACTGC CCGAGACACT GCGCGCGCGC GAGGTGGTCG ACTTTGTCGC GGCCCACTAC
CCGGCTCCGG AGGACCGCGA TGCGCTGCTC GACCGCTTCG GGCTGACCGA TCTGGCGCAC
CGTCAGACCG GTGGTCTCTC CGGCGGTCAG AAGCGCCGAC TGGCCGTGGC CCTCGCCTTC
GTCGGCCGGC CCCGCCTCGT CTTCCTCGAC GAACCGACGA CCGGCCTCGA CGTGGAGGCC
CGCCGGGTGC TGTGGGACCA CATCCGCGCG TTCCACCAGG AAGGCGGCAC GGTGGTGCTG
ACCAGTCACT ACCTCGACGA GGTGGAGGCG CTCGCAGAAC GGATCGTGGT CGTCTCCGGC
GGGCGGGTGC TCGCCGACGG CTCCGTCACC GCGATCCGCG GGATGGTCGA CGTCCAGCGC
GTCAGCCTGG TGACCGCTTC GTTGCCGTCG CTTCCGGGCG TCATCAAGGT CGAGGAGATC
GACGGACGCA CCCACGTGCT GACCAGGGAC GCTGACCAGT TCGTACGCGA CCTGGTGGGC
AGCGGCGCGC CCTTTTCGGG GCTGGAGATC CGGCCGACGA CGCTCGAGGA GGCCTTCATG
GCCATCTCGT CCGCCTGA
 
Protein sequence
MVNQPLAVPA RTPAPQAAEV VARAVGVTRC YGGTTALDGL DLEVRAGELV GLLGPNGAGK 
STLIHVLTGL RRPNRGRCEL FGRDPRTPAG RRYIGVTPQE TGLPETLRAR EVVDFVAAHY
PAPEDRDALL DRFGLTDLAH RQTGGLSGGQ KRRLAVALAF VGRPRLVFLD EPTTGLDVEA
RRVLWDHIRA FHQEGGTVVL TSHYLDEVEA LAERIVVVSG GRVLADGSVT AIRGMVDVQR
VSLVTASLPS LPGVIKVEEI DGRTHVLTRD ADQFVRDLVG SGAPFSGLEI RPTTLEEAFM
AISSA