Gene Francci3_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4200 
Symbol 
ID3907165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5014658 
End bp5015668 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID637881528 
Producthypothetical protein 
Protein accessionYP_483277 
Protein GI86742877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTA CGATCGCTCC CGGCAGCCCT GTCCGAGCCG GAGACGTCCC GACAACCTGG 
CGGTCGTGGC ATCTGCACCT GGGGTCCGTG GCCGGATCCC TTCATGACCG CGTACTCGGC
GAGGTGATCG GCCCCACCGT CGACGACGTA CCTGGCAAAC CGTGGTTCTT CATCCGCTAC
TGGCAGGCTG GTCCACATCT CCGGTTCAGA GTCGGCGACT TGGACGACGA CGAGGCGCAA
CAGGTCGAAC AGTCCCTGCG GGAGCGGCTC GCGCGTGCCG GGACGCTGCG CGATGGCGAG
GAGCCTCTCG ACGCGGAGAG CCACCGGACC GCCGCTCGGC GTCTGGCTGC CACCGGCGGC
GAGGCTGAGG ACACGGCTGG GGGGCCGCTG CCGCCGGGAG TCCACCGCGC GGTGTTCGTG
CCCGAGACCG AGCGGTACGG CGGGGCAGCG CTGATGCCTG GTGCGGAACG GCTCTTCCAG
GTCTCCAGCG AGCTGGTCAG AACACATCTG CCGAGCCTGC CAGGCACCCG GGAGCGGTCG
GCCGTCGCAC TCCGGGCCAC GGTGTCGGCG GGCGCTGCGC TGGGCGGACG TGGCGAGCAG
GCCGACTACT ACCACCAGGC GCTGCACGCC TGGCGCGGCA TGGTGGCGGC CGGATTCGGC
TACTCCGAGC AGCAGTTGGA TCGACTCACC GGTGCGGACC GCCCGGCGCT GTCCACGGCG
GGGGCATCGC GACGCGGGAG CATCGACCCC GAGCGCCACG GTGCTTTCGC CCTGTGGCAC
CGCCTCCTGA CCGAACTCGC CGACACGGTA CGCGCAACCG GCACGACCCA CCCGGGCCGC
ATCGTGCTCT CCCACGTCCA CATGTTCCAC AACCGTCTCG GCCTGAGTCT GGTCGACGAA
CTGCAGACGT ACGCGCGGCT CGTCCGGCTC TTCCCCCTGG ACGCTCCCGT CGGCGGCCCG
TCCGGCACGC CTGCCGCCCC CGACCCGCAT CGCAGCGCAC ACGAGGGGTG A
 
Protein sequence
MNRTIAPGSP VRAGDVPTTW RSWHLHLGSV AGSLHDRVLG EVIGPTVDDV PGKPWFFIRY 
WQAGPHLRFR VGDLDDDEAQ QVEQSLRERL ARAGTLRDGE EPLDAESHRT AARRLAATGG
EAEDTAGGPL PPGVHRAVFV PETERYGGAA LMPGAERLFQ VSSELVRTHL PSLPGTRERS
AVALRATVSA GAALGGRGEQ ADYYHQALHA WRGMVAAGFG YSEQQLDRLT GADRPALSTA
GASRRGSIDP ERHGAFALWH RLLTELADTV RATGTTHPGR IVLSHVHMFH NRLGLSLVDE
LQTYARLVRL FPLDAPVGGP SGTPAAPDPH RSAHEG