| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4186 |
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| Symbol | |
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| ID | 3907151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4995603 |
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| End bp | 4998494 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881514 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_483263 |
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| Protein GI | 86742863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CTGGCACGGA TACCACCCAC GACGCCGGGA AGACGGTGGA CTTCTTCGTC
TCCTACGCCG GCGTCGACCA GGCGTGGGCG GAGTGGATCG CGGACACCCT GGAGAGGGCT
GGCCGCCGCG TGCTGCTCGA GGCATGGGAC TTCGTCCCCG GGTCGAACTG GCCTGCGCTC
GTCCAGGCGG GACTGACCAC CGCAGGCCGG CTCCTGGCGG TGCTGACCCC GGCCTATCTC
GCCTCGGTCG GCGCGGCGGC GCAGTGGCAG GCGATCTGGG CGGCGGACAT GGGCGGGCGG
GGACGCCGGC TGATTCCGGT GCAGGTCGAG CCGTGCGAGC CCGACACGCT CGGCCTGCTC
GGCAGCCTCA CCTGGATCGA CCTGACCGAC CTGACCGACC TGGCCGGGCC GGGCGCCGCC
GCAGCCGCTC GCGCCCGGCT GCTGGACGGG ATACGTGCCG CCGTGACAGG GCAGGTGCGG
TCGGTCAATC CCACGCCGCT CCCCACCCGC GACACCCGCG ACGTGCCCGC GGCGGCGGAC
GAGTCCGAAC GGGCAGCGCG GTATCCGGGT CGGCCCCCGC TCGTGTGGGG GCTGCCGCCG
GAACTGGTGC GTAACCCCCG CTTTGTCGGG CGTGCATCCG AACTCGCCGA GCTGCGCGCG
CGACTGACGG GCTTCGACCG GGCCGTGCCC GGCCCCGGTT CCCCTGTGCC GGGGGTGCGG
GCCCAGGTGG TGCATGGCCT GGGCGGGGTC GGCAAGACGG AGCTCGTCGT GGAGTTCGCC
TACCGGTACA GCCACGCCTA CGACCTGGTC TGGTGGATCC GCGGCGACAA GATGACGGAG
GTCGTCGCCG GCCTCGCCGC CCTCGCGGCC CAGCTGGGAC TCGCCCACGT GGAGGGGGAC
GAGGCAGCGG CCGCCGCGGC GGCCGAGGCG TTGCGCGCCG GTCGACCTCA TCGCCGGTGG
CTGTTGGTCG TCGACAATGC CGTTATTGGC AATGCCGTTA TTGGCAATGC CGTTATTGGC
AATGCCGTCA TGGGCAACAA CGCCGGTGCT ACCGCCACCA ACCCCTACCT GTCCAGGCTT
CTGCAGGCCG CGGAGACCGC CGAGTTCGGA CATCTCGTGA TTACCTCGCG CAACCCCGAC
TGGGCCGGTC GGGCTACCGC AACCGAGGTC GCGGTGCTGC CCCGGAGGGA CACGATCGAT
CTGCTGAGGA GGCACCGAGC CGCGCTGGAG GACGCCGAGG CTGAGCGGCT CGCGGCCGCG
GTCGGGGACC TGCCGCTGGC GGCGGAACAG GCCGGAGCCT GGCTCGCCGC CAGCGGCATG
ACCGTTTCGG ACTACCTGGC TGCGTTGCGC GTGGAGACTC GGGAACTCCT TACCCGCGGA
AAACCGGACC GCTATCCGTT CATTGTCGCC GCGGCGTGGA ACCTGGCCCT GGACGAGATC
GGACCGGACG AACCGGCCGT CGTCGAGCTG CTGCAGCTGG CCGGATTCTT CGGCCCGGAG
CCCATCCCGC TCGACCTGTT TCCCGCGCTG GTGGTGCTGG GGGAGAGCAA CGGGGAGCTG
GGGGAGAGCA ACGGGGAGGG GACGCTCTGG TCGGCGCTGA GCGCGGCCTG TTCCTCCCCG
CTGCGCTGGG GGGACGTGGT CGCCCGCCTC CGTGCTCTCG GGCTGGGCAA GGTCGAACAG
GGAACCATCA CCTTGCATCG GCTGGTGCAG GCGGTGCTGC GGGACCGGGT TCCGACGTCG
CGGCACCTGG AGTTCCGGGC CACCGTCGGC TGGTTGATGA TCAGGGCCCT GCCCACCGCG
ATCCAGGGTA ATCCGGCGGC CTGGCCGCGC TGGGCCGCGC TGCTCCCACA CCTTCAGGCC
CAGATCGAAG CCGAGCCGTC CCCGGCGGAC GCGAACGCGG CGGGCATGCT GGGGCTGGGC
AATCTGGCGG CGCTCTATCT CCAGGAAACC GGACAGCTCG CCGCCGCCGT GGACCTGCAC
ACCTGGGTGC TGGCTCGAAC CGAGCAGGTC GTGGGAACCG ACCACCCCAA CACCCTGGTT
CTCCGGAACA ACCTCGCCCT CGCCCTGCAG AAGGCCGGAC GCATTTCCGA GGCCATCGGG
TTGTACGAGC GGATCCTGGC GCGGGCCAGC CGCATCCTCG AATCCGATGA TCCCAATCTG
GGGATCAGCC GTAACAATCT CGCCAGCGCC TATTGGGCCG CCGGACGCAT CGCGGAGGCC
GTCGAACTGC TCGAGCAGGT TGTCGACGAC GCTGGACGGA TCCGTGGCCC GGACCATCGC
GACACCCTGC TGGCCCGGAG CAACCTGGCC AACGCATACC AGACGGCGGG GCGCTTGGCG
GAGGCGATCA GGCTGCACGA AGAGGTTCTC GTCGACGTCG TCCGGGTTCT CGGCCAGGAG
CATCTCACGA CCTTCCTCGT GCGCAACAAT CTCGCCAGCT CCTATCAGGC CAGCGGACGG
ACGACTGAGG CCCTCGACCT GTACGAGCAG GTACTGACCG GCCGGGAAGG CGTTCTCGGC
GACAACCATC CCGACACCCT GCTCTCCCGC AGCAATCTCG CCGACGCCTA CCAGGCGCTC
GGACGTCTGC CCGAGGCGAT CGATCTGTAC GAGCGGGTTC TCTCCGATGC CCGCGGTGTT
CTCGGCGCTG ACCATCCACA CATCCTGATC ACCTGGAACA ACCTGGCCTG CGCCGTTGCG
GCCGCGGGGC GCCTCGCGGA GGCGATCGAC CTGTACGAGC GGGTACTGGC CGACCAGCGG
CGTGTCCTCG GACCGGATCA CCGCGACACC CTGACCTCGC AGGGAAACCT CGCCAACGCC
TACCGGGCCG CCGGACGCAC GAATGCCGAC GCCGCTGATG GTGCCGACGC CGCTGATGGT
GCCGGGGACT GA
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| Protein sequence | MNPAGTDTTH DAGKTVDFFV SYAGVDQAWA EWIADTLERA GRRVLLEAWD FVPGSNWPAL
VQAGLTTAGR LLAVLTPAYL ASVGAAAQWQ AIWAADMGGR GRRLIPVQVE PCEPDTLGLL
GSLTWIDLTD LTDLAGPGAA AAARARLLDG IRAAVTGQVR SVNPTPLPTR DTRDVPAAAD
ESERAARYPG RPPLVWGLPP ELVRNPRFVG RASELAELRA RLTGFDRAVP GPGSPVPGVR
AQVVHGLGGV GKTELVVEFA YRYSHAYDLV WWIRGDKMTE VVAGLAALAA QLGLAHVEGD
EAAAAAAAEA LRAGRPHRRW LLVVDNAVIG NAVIGNAVIG NAVMGNNAGA TATNPYLSRL
LQAAETAEFG HLVITSRNPD WAGRATATEV AVLPRRDTID LLRRHRAALE DAEAERLAAA
VGDLPLAAEQ AGAWLAASGM TVSDYLAALR VETRELLTRG KPDRYPFIVA AAWNLALDEI
GPDEPAVVEL LQLAGFFGPE PIPLDLFPAL VVLGESNGEL GESNGEGTLW SALSAACSSP
LRWGDVVARL RALGLGKVEQ GTITLHRLVQ AVLRDRVPTS RHLEFRATVG WLMIRALPTA
IQGNPAAWPR WAALLPHLQA QIEAEPSPAD ANAAGMLGLG NLAALYLQET GQLAAAVDLH
TWVLARTEQV VGTDHPNTLV LRNNLALALQ KAGRISEAIG LYERILARAS RILESDDPNL
GISRNNLASA YWAAGRIAEA VELLEQVVDD AGRIRGPDHR DTLLARSNLA NAYQTAGRLA
EAIRLHEEVL VDVVRVLGQE HLTTFLVRNN LASSYQASGR TTEALDLYEQ VLTGREGVLG
DNHPDTLLSR SNLADAYQAL GRLPEAIDLY ERVLSDARGV LGADHPHILI TWNNLACAVA
AAGRLAEAID LYERVLADQR RVLGPDHRDT LTSQGNLANA YRAAGRTNAD AADGADAADG
AGD
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