Gene Francci3_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4181 
Symbol 
ID3907146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4985911 
End bp4986480 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID637881509 
Producthypothetical protein 
Protein accessionYP_483258 
Protein GI86742858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00174567 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.815603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCT TCTCCCGGAG GACCGACCTG ATCGGCTTGG TGGGATCCCG GCGGGTGGTT 
TTGAGGCTCA GGTGGGTGGT TTTGAGGCGC CGGTGGATCG GGAAGCCATC TGATGGCGTA
ACACTCGGCC TCGGCGGCAC GTTCTCGGCG GCGGCGCCCC GGGCCGATCC CGGGCGCCGA
CCAGGAAGCC GAGGTCAGCG TGGCAGTGCC GCCGAGGCCG ACCGACCGGG AGCGGGCGCT
GTTCGGAGAA CTGGCGGCCA CCTGGACCTT CGACCCGAGG AACTCCGACC TGAGGAACTC
CGACCCCAGA AAGTCCGATC CGAGCAAGGG ATCCCGGCGA TGACCACTCC ATTCCCGTCG
CGGCAGCGGA CGGCGCCGTC GACCACCCGG CCGCGTTACC CGCTGGCACC AGCCCGGAAG
CTGACCGTGG AGACGGTCGC CAGCCGCGGC GGGCTGCATC CCGACCTGGT CCACCGGTTC
GTGGCACTCG GCCTGCTGGA GGCCTCCCGC GACGCCGAAC TGGTCGTCAG CTGTCAGGCA
GCGGACGCAC GGCACGGGCT CGCCGCCTGA
 
Protein sequence
MRAFSRRTDL IGLVGSRRVV LRLRWVVLRR RWIGKPSDGV TLGLGGTFSA AAPRADPGRR 
PGSRGQRGSA AEADRPGAGA VRRTGGHLDL RPEELRPEEL RPQKVRSEQG IPAMTTPFPS
RQRTAPSTTR PRYPLAPARK LTVETVASRG GLHPDLVHRF VALGLLEASR DAELVVSCQA
ADARHGLAA