| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4174 |
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| Symbol | |
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| ID | 3907139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4976777 |
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| End bp | 4978456 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637881502 |
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| Product | copper resistance protein CopC |
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| Protein accession | YP_483251 |
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| Protein GI | 86742851 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1276] Putative copper export protein
[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.960366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGCA TCCTGGTGGT GGCCGTGACG TTCCTGGTCA TGGCCACCAC CTCCATCGGT
TTTGGCCTCG GGGTCCCGCC GGCGTCGGCG CATGCCCTTT TGACGGGTAG CGACCCCGTG
GACGGCGCGG CACTTGACGT CGCACCCACA CGGGTAACCC TTGACTACAG CGAGTCAGTA
CGGGTCTCGC GCGATTCGAT CCGGGTGCTC GATTCCGCGG GTAGGCGGGT CGATGATGGT
CGTGCCGGAT CTGGTCCCAA GGCGTCGCAG GCGACGGTCG CGCTCCGGCC GGGGCTGCCG
AACGGCACGT ACGTGGCGAG CTGGCGTGTC ATCTCGGCGG ATAGTCATCC TGTTTCCGGT
GCGCTCGCCT TCGGTGTGGG CGGGCCGCCG GATGCCGCCG CCGCGGCGGC CTCCGGCACA
TCGGGCTCCT CGACGGTGGG CGTCGTCTTC GCCATGGCGA GATTTCTCGG ATACGCCGCG
ACGGCCCTGT TGCTGGGCGT CTGTTTCTTT CTGATCGTGC TCTGGCCGAC AGGTCTTCGT
GCGGCCGGTC CCGGCCGGCT GTTGATGGCA GCGTGGGGAT TATCCGTTTT TGCGGCATTC
GCGCAGCTGC TGCTGCAGGG CCCCTACGCT GCCGGGCTCG GCCTCGGGGG ACTCGGGCAG
TGGTCGGTTC TGTCGACCAC CCTGGCGGAT CGGTTCGGTC ACCTGCTGCT GATCCGTCTG
CTCGCTCTGG CTTTGATGGT GCCTCTCGTG CGGCGGCTGT TGCGAACCGG GTCGGTGGAT
CCGCGGGGAA ACGGGGAGCT CGCCGGTCTC GGTGTCGTGG TGGCCGTGAC GCTTGCCATG
ATCGGTCATG CCAGCGTCGG CGATCTGGCT TGGCTGGCTA CCACCAGCAC GACGGTGCAT
GTGATCGCCA TGTCGGTGTG GATCGGTGGT CTGGTGATGA TTGCCGGTTT CCTGGTGCGC
CGCGCATCGG CCACCGAGCT GGCGGAGATC CTTCCCCGGT GGTCGAAGAT CGCGGTTGTG
GCCGTTGTCG CCGTGATGGT CAGCGGGGTC TTCCAGGGCT GGCGTGAGGT CGGCCCGCCA
CGGGCCCTGA TTGATACCAG CTATGGTCGA CTGCTGGTGT ACAAGGTGTG GTTGGTCCTT
GGAATGATCG CTCTCGGCGC TCTGGCGCGG CGGTGGGTCC GCCGGCAGTA CAGAACGAAC
AGAAATCAGC CGGCCGGCCG GCCGGACCGC TCGTCGCATG CCGTTCTGCT TGCCGGGCTG
CGCCGGGGTG TCATGGCGGA AATCGTGCTC GGGGCTGTCG TGCTGGGGAT CACGGCTGGG
TTGGTGAACA TGGTACCGGG ACGTACCAGC TATTCACCGC CGTTCTCCGA CACCACCTTC
GCGGGTCCGA TGACGGTGAA GGTGAGGGTC TCGCCGACGC GGGTGGGCGC CCAGACCCTG
GACGTCCAGG CCACGGACCC GAGCGGCAAA CCGCAGAAAC TGGTGGAGGC CAGTGTGGCG
TTGTCGTTGC CGGCCGCCGA TCTCGGCCCC TTCACTGTTC CGCTGAGCCT GGCCGCGCCG
GGCCATGCGC GGAGCGACGG GATCCGGGCG CCGTTGCCCG GTGAATGGCA ACTTCGGCTC
ACGCTCCGAG TGAACGACTT CGACCAGTAC GTGACAACCG TGTTCTACCA GGTCCGATGA
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| Protein sequence | MRRILVVAVT FLVMATTSIG FGLGVPPASA HALLTGSDPV DGAALDVAPT RVTLDYSESV
RVSRDSIRVL DSAGRRVDDG RAGSGPKASQ ATVALRPGLP NGTYVASWRV ISADSHPVSG
ALAFGVGGPP DAAAAAASGT SGSSTVGVVF AMARFLGYAA TALLLGVCFF LIVLWPTGLR
AAGPGRLLMA AWGLSVFAAF AQLLLQGPYA AGLGLGGLGQ WSVLSTTLAD RFGHLLLIRL
LALALMVPLV RRLLRTGSVD PRGNGELAGL GVVVAVTLAM IGHASVGDLA WLATTSTTVH
VIAMSVWIGG LVMIAGFLVR RASATELAEI LPRWSKIAVV AVVAVMVSGV FQGWREVGPP
RALIDTSYGR LLVYKVWLVL GMIALGALAR RWVRRQYRTN RNQPAGRPDR SSHAVLLAGL
RRGVMAEIVL GAVVLGITAG LVNMVPGRTS YSPPFSDTTF AGPMTVKVRV SPTRVGAQTL
DVQATDPSGK PQKLVEASVA LSLPAADLGP FTVPLSLAAP GHARSDGIRA PLPGEWQLRL
TLRVNDFDQY VTTVFYQVR
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