Gene Francci3_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4163 
Symbol 
ID3907128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4965075 
End bp4965581 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content73% 
IMG OID637881491 
Producthypothetical protein 
Protein accessionYP_483240 
Protein GI86742840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00958107 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG GAGGTTCTGT TCAGCCGTCG CTGTTCGATG ACCTCGACGA TGCCGATTCG 
GGCGCGGTGG TGGTGGGTGG GCTGGTGGCT GGCCAGATGA TGAGCACCGT AGGTTCCGAT
GTTCCTTCAT CGGTGGTGGT GGCCACGATT CCGGCGGATA CCGGGAAGAC GGGACGCGCG
GCGGTGTGGG TGGGTGGGCG GGCCGCCCGT CGACCGGCGT CGGCGCGGGG CGCTCGGCGT
GGTCTCGGGG TGGATGCGGG GGCGGCCGGT GAGCGTGGGA CGGGTGGGGA TCCTGGGCCT
GGTCGGCAGC GTGGCCGGTC GGCGGGGCGT TCTGCCGCTG CCTCGTCGGC CGGTGAGCCT
GCCGTGTCAG ACGTGGACGG TGAGGCGGCG GCGGACGCGC GGTGGATCGC CGCTCAGCTC
ACGCGGGCGC CGGAACCCTC GGCGTTGATG GCGGCGGCGA TCGTGACCGC GCTCGCGCCG
AAACCCACGC GGAACGGCGG TGGCTAG
 
Protein sequence
MSTGGSVQPS LFDDLDDADS GAVVVGGLVA GQMMSTVGSD VPSSVVVATI PADTGKTGRA 
AVWVGGRAAR RPASARGARR GLGVDAGAAG ERGTGGDPGP GRQRGRSAGR SAAASSAGEP
AVSDVDGEAA ADARWIAAQL TRAPEPSALM AAAIVTALAP KPTRNGGG