| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4154 |
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| Symbol | |
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| ID | 3907119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4954306 |
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| End bp | 4955757 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881482 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_483231 |
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| Protein GI | 86742831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC CCGAGGCCCA CTCCGGCTCC GCGGATGGAC CGAACCCGTC GAACGATCTG
GAGCAGGCCG GTCCGAGTCT CGTGCCGCTG GCCACGACCC TGATCGTCGG GGCGTTCGCG
GCCCTGCTCG ACACCACTGT CGTGGCGGTC GCGATCGACA CGCTGGGGCG CGACCTGCAA
GCGGACATCA CGGTGATCCA GTGGGTCACG ACGTCCTACC TGCTGGCGAT GGCTGCCGTC
ATCCCGGTGG TCGGCTGGCT GGTCGACCGG TTCGGCGCCC GCGCGATCTG GTCGGGTGCC
CTCGGGCTGT TCCTGGCCGG ATCGGTGCTG TCAGGCCTGG CCTGGTCCGC TGGCGCGCTA
ATCGCCTTCC GGGTGCTGCA GGGCCTGGGT GGCGGCATGA TCCTTCCGCT GACCCAGCTG
GTACTCGCCC GGGCCGCCGG CCCGCAGCAC TTCGGGCGGG TCATGGGCGT CGTCGGCCTG
GTCGGCCAAC TGGCGCCGAT CTCCGGCCCG GTGCTGGGCG GCCTGCTGAT CGACACCTGG
GGCTGGCGGT GGATCTTCTT CGTCAACGTG CCGATCGTCG TGGTCTCGCT GCTCATGACA
ACACGGTGGT TCCCCCGCGA AGACCCGCGC ACGGAGCGTT CCCTGGACGT GGTGGGCCTG
GTCCTGCTGC CCACCGGCAT CGTGGCGATG ATCTACGCGC TGTCGAACGT CGAGTCCGGA
AGCACGGTGG TGTCCGCACA GGTGCTCGTC GCCGCGCTGG TCGGCGTCGC GCTGCTGGCC
GCCTTCGTCC TGCGGCCGAC GACACCAGGC CGGCCGTCGC TCATCGATCT ACGCCTGTTC
GGCGACCGTT CCTTCCGCGG CGGCTCGGTG ATGCTGTTCG TCTTCGGCGT GACGAGCTGG
GGCCCGATGT TCGTGCTCCC CCTCTACTAC CAGCAACTGC GGGGGCTGTC CGCACTTGAC
GCCGGGTTCG CCCTCGCACC GCAGAGCGTC GGCCTGGGGC TTGCGTACCT CGCAACCGGC
CGGTACGCCG ACCGGCTCGC GCCACGCCCG CTCGTGGCAG GGGGTCTGGT GGTCGCGAGC
GCGGGCACTC TGCCGTTCGT CTTCGCCACC GCCGACAGCA ACCTGACCCT GCTTGGCATC
TCGCTGTTTG TCCGCGGGAT CGGGTTCGGG GCCGCGAGCC TGCCTGCCAG CGCCGCCGTG
TACCGGACGC TACGAACGGC TGACATTCCG GGCGCGACCA GCGCGAGCAA CGTCATCCAG
CGCGTCGGCG CGGCGACCGG CACGGCCGTG ATGGCTCTCA TTCTCCAGGC GGACGGGTTC
ACCCCTGCAC TCACCTGGAT GTTCGTCCTC ACCTCGGGCG CGCTCGCCGG GACCGTGTTT
CTGCCAGGGC AGAAGCCGGC ACCGGCGCCG CGGGACACGG TGCCCACGAC GACGGCCACC
GGCGCCCAGT AG
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| Protein sequence | MTRPEAHSGS ADGPNPSNDL EQAGPSLVPL ATTLIVGAFA ALLDTTVVAV AIDTLGRDLQ
ADITVIQWVT TSYLLAMAAV IPVVGWLVDR FGARAIWSGA LGLFLAGSVL SGLAWSAGAL
IAFRVLQGLG GGMILPLTQL VLARAAGPQH FGRVMGVVGL VGQLAPISGP VLGGLLIDTW
GWRWIFFVNV PIVVVSLLMT TRWFPREDPR TERSLDVVGL VLLPTGIVAM IYALSNVESG
STVVSAQVLV AALVGVALLA AFVLRPTTPG RPSLIDLRLF GDRSFRGGSV MLFVFGVTSW
GPMFVLPLYY QQLRGLSALD AGFALAPQSV GLGLAYLATG RYADRLAPRP LVAGGLVVAS
AGTLPFVFAT ADSNLTLLGI SLFVRGIGFG AASLPASAAV YRTLRTADIP GATSASNVIQ
RVGAATGTAV MALILQADGF TPALTWMFVL TSGALAGTVF LPGQKPAPAP RDTVPTTTAT
GAQ
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