| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4139 |
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| Symbol | |
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| ID | 3907104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4940479 |
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| End bp | 4941450 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881467 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_483216 |
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| Protein GI | 86742816 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.551556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG ACGTGGGCGC CGAGCGGGGC CGGGTCGCCG TGATCGGCGC CGGCTCGATC
GGGCTTGGAT GGATCACTCT GTTTCTGGCC CACGGGTATC GGGTGCGGGT CAACAGCACC
CGCAGCAACA TCGAGACGGT CATCCACGAT GCGCTGCGGC TGTTCACCCC GGGGCTGCCC
GGCGCATCGC GGGACCCCGC GGACCTCGCC GGACGGCTGG AGATCGAGCC GGACCTGGAG
CGGGCGGTCG CGGACGTGGC GGTCGTCCAG GAGAACACAC CCGAGAACCT GGAGATCAAG
CAGGATCTGT TCGCCCGGCT GGAGAAACAC GCCGCGGCCG GAACGCTGCT GCTGTCGTCG
ACCTCGACGA TGCTGCCGGC CGACCTGGGC GCCCGCATGG ACAACCCGAG CCACCTCATC
GTCGGTCATC CGTTCAACCC ACCACACGTG ATACCGCTGG TGGAGGTGGT GGGAGACACA
ACCTCGGACC CGGACGCGGT CAGCGCGGCT GCCGAGTTCT ATCGCTCGGT CGGGAAGACT
CCGGTGGTCC TGCGCCGGCC GATCGCCGCC TTCGCCGCGA ACCGGCTTCA GTCAGCCCTC
CTGCAGGAAA GTATTCACCT CGTCCGCGAG GGGGTGGTGA CGGTGGCCGA GCTCGACGAC
ATCGTGACCG GCTCCCTCGG CCCACGCTGG GCGACGGTTG GTCCCTTCCA GTCGTTCCAC
CTCGGCGGCG GGCCGGGGGG CCTGCGGAAC TGGCTGGGCA CACTCGGCAG CGGCCTGCAG
CAGGGCTGGG CGGCGCTGGG ACGGCCGGTG CTGGACGAGG ACACCCTGGA TCTGGTGCTG
GACCAGACGG ACCAGGCATT CGGCGGGATC GCCTACGAGG AACTCGCCGC GCGTCGGGAC
CGGCTGCAGA AGGCGGTGCT GGCTGCGGTC GCCAGTGCCG ACGACGCGCC ACCGCCCCGG
TCTGGCTCCT GA
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| Protein sequence | MTTDVGAERG RVAVIGAGSI GLGWITLFLA HGYRVRVNST RSNIETVIHD ALRLFTPGLP
GASRDPADLA GRLEIEPDLE RAVADVAVVQ ENTPENLEIK QDLFARLEKH AAAGTLLLSS
TSTMLPADLG ARMDNPSHLI VGHPFNPPHV IPLVEVVGDT TSDPDAVSAA AEFYRSVGKT
PVVLRRPIAA FAANRLQSAL LQESIHLVRE GVVTVAELDD IVTGSLGPRW ATVGPFQSFH
LGGGPGGLRN WLGTLGSGLQ QGWAALGRPV LDEDTLDLVL DQTDQAFGGI AYEELAARRD
RLQKAVLAAV ASADDAPPPR SGS
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