| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4138 |
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| Symbol | |
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| ID | 3907103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4939458 |
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| End bp | 4940369 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881466 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_483215 |
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| Protein GI | 86742815 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.452621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA CGGAATCTGG TCACAGCCCT CAGCCGGCTT CGGCGCTCGG CCGGGGCGAT
GCCGCACCAC CGGGCCCCGT CCGCCGCACC TGGCTGGTCA CCGGGGCTTC GCGGGGACTG
GGCCGCGCCA CCAGCGAGGT TCTGCTGGCC GCGGGCGACC GGGTCGTCGC GACGGCCCGC
GACCGTGACA CGCTCAAGGA GCTGGCTGAA CGGTATCCCG ACCAGCTTCT CCGGTTCGCC
CTGGACGTGA CCGACCGGTC AATGGTGTTC GACGTCGTGG ACCGAGCGGT CGCCGCTGCG
GGAAGCATCG ACGTACTGCT GAACAACGCT GGCTACGGGC TTTCGGGTGC AGTCGAGGAA
GTCACCGAGA AGCAGGCCCG CGCACAGCTG GACGTCAACT TCTTCGGTGC ATTGTGGTGC
ACTCAGGCGG TGCTGCCTGT TATGCGCAGG CAGGGTGGCG GCCACATTCT TCAGATGTCC
AGCATCGCCG GCGTGGCGAC CTATCCTAAC ATCGGCATGT ACCACGCCAG CAAGTGGGCG
CTCGAAGGCA TGAGCGAGAC TCTGGCACAC GAGGTCGCCG ATTTCGGCAT CCGTGTGACG
ATCGTCGAGC CGGGCGAGTT CCGGACCGAC TGGAGCGCCT CCAGCATGGA GCGGGCGACG
CCGATGACCG AGTACGACGA CGTGCTCGCC CGGCGTCGGC ACGGCATGTC CGGGGTGTAC
GCGCACGTCC AGCCTGGTGA TCCCCACAGG CTGGGCAAGG CGCTGCGGAC CGTCGTCGAC
GCCGCGCAGC CACCGCTGCG GATCCTGCTC GGCAACAGCG CGGCCGACCT CGCGCCGCAG
GTGTACCGCG AGCGGCTCGC GGAATGGGAG CGGTGGGATG CGCTGGCGCG GACGACGGAT
TTCGCCAGCT GA
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| Protein sequence | MSDTESGHSP QPASALGRGD AAPPGPVRRT WLVTGASRGL GRATSEVLLA AGDRVVATAR
DRDTLKELAE RYPDQLLRFA LDVTDRSMVF DVVDRAVAAA GSIDVLLNNA GYGLSGAVEE
VTEKQARAQL DVNFFGALWC TQAVLPVMRR QGGGHILQMS SIAGVATYPN IGMYHASKWA
LEGMSETLAH EVADFGIRVT IVEPGEFRTD WSASSMERAT PMTEYDDVLA RRRHGMSGVY
AHVQPGDPHR LGKALRTVVD AAQPPLRILL GNSAADLAPQ VYRERLAEWE RWDALARTTD
FAS
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