Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4126 |
Symbol | |
ID | 3907091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4927773 |
End bp | 4929218 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881454 |
Product | putative replication initiation protein |
Protein accession | YP_483203 |
Protein GI | 86742803 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTTCCG TGGATGTGGG CGTGAGCCTG CCCGAAAACC GGCCGGTCGC GGGTGGGTGT TCCCGCCCGA TCCGCCTGTC CGGCCATATT GATCATGTGG ATGTCGGTAC TGGTGAGGTC CGGCGGGCGT TTACCAGTGC CGGTGAGCCG GGCGGGGTGC TGCATGTGCG GTGCGGGAAC CGGCGGGAGT CGGCGTGTCC TGCCTGTTCG GCGGTGTACA AGCGGGACGC GCGGCGGCTG GTCCTGGCCG GGCTGGCGGG TGGCAAGGGT GTGCCGGCAT CGGTGTCGGA TCATCCGGCG TGGTTCGTGA CGTTGACCGC GCCGAGCTTC GGGCCGGTGC ACTCACGGCG CCAGCGGGGC GGGAAGACGG GTCCGGTGCG GGCGTGTCAT CCCCGGCGCG GTCTGTGTCC GCATGGGAAA CCGGCGGGCT GTCATGAGCG GCACCATGAG GCGGATTCCC GGCTCGGGTC GCCGTTGTGC GCGGACTGTT ACGCCTACGG CCGGTCGGTG GTCTGGAACG CGCTCGTCCC CCGGTTGTGG AAGGCCACCC GCGACGGCAC GGAATCGGCG GTGGCGGCGG CAGCCGGGCT GACCGTGGCA GGGCTGCGCC GCGCGGCGCG GCTGTCGTTC GTGAAAGTCG CGGAGATGCA GGCGCGGGGC GTCGTCCACC TGCACGTAGT GATCCGGGTG GACGGTCCCG ACGGGCCGGG CTCGGCTCCT CCGGCCTGGG CGGCCGGTGA GCTGGTCGCA GACGCGCTGC GCGGGGTCCT GAGCGTGGTG GCAGTACCGG CTCCGGATCC GGACGCGCTC ACCCTTGACA CCACCGCCGT TGCGGATGAC GGCTGGGCGG TGCGCTGGGG CGCACAGGTC GATATCCGCC GGATCGCGTT GGAGGGGCCG GCGGATGTGT CCCGGGTCAG TAACTACCTG GCGAAGTACA TCACCAAGTC CGCGGCGGCG GGTGGTGAGT TGGATCATCC GGTGCGGTCG CTGGCCGCAC TCGGCCGGCT GACGCTGCCC CCGCATGTGC GCCGGCTGGT GGAGACCTGC TGGCGCCTCG GCCACGACCC GGTATTCACG ACGGCGTTGG ATGCGACGCT GGGCCGGGAC TCCGGCGACG TCCCCCGGCT GATCCGCTGG GCCCACACCT TTGGGTTCGG CGGCCACTGG TTGACGAAAA GTCGGGCGTA CTCGACGACG TTCACCGCGC TGCGGACGGT ACGGCGGGTC TGGTCCCGCA CGATCGGCGC GGCCATGGCA GGCCGGGCAC CGGTGGATGC GTTCGGCCGA GCTGACGGCG ACCCAAACAC GATCGTCCTG GGTACGTGGT CCTATGCCGG CCGGGGGCTG CACCTCGGGG GCCATGGTGG GGGCTCGGGT CCGCCTGATC TGCCAGCGTC GCGGGCGGCT GGGAGCCCGG TGGGCCCCTG GCGGGCCGAA CGGTGA
|
Protein sequence | MVSVDVGVSL PENRPVAGGC SRPIRLSGHI DHVDVGTGEV RRAFTSAGEP GGVLHVRCGN RRESACPACS AVYKRDARRL VLAGLAGGKG VPASVSDHPA WFVTLTAPSF GPVHSRRQRG GKTGPVRACH PRRGLCPHGK PAGCHERHHE ADSRLGSPLC ADCYAYGRSV VWNALVPRLW KATRDGTESA VAAAAGLTVA GLRRAARLSF VKVAEMQARG VVHLHVVIRV DGPDGPGSAP PAWAAGELVA DALRGVLSVV AVPAPDPDAL TLDTTAVADD GWAVRWGAQV DIRRIALEGP ADVSRVSNYL AKYITKSAAA GGELDHPVRS LAALGRLTLP PHVRRLVETC WRLGHDPVFT TALDATLGRD SGDVPRLIRW AHTFGFGGHW LTKSRAYSTT FTALRTVRRV WSRTIGAAMA GRAPVDAFGR ADGDPNTIVL GTWSYAGRGL HLGGHGGGSG PPDLPASRAA GSPVGPWRAE R
|
| |