Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4113 |
Symbol | |
ID | 3907077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4917447 |
End bp | 4917968 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881441 |
Product | IS630 family transposase |
Protein accession | YP_483190 |
Protein GI | 86742790 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGC CGTGTCCGAC GCTTGTATCG GGCATGAGGT ATGCGGATGG TGGCGGGCTT ACCGCGCAGG GTCGTGCCCG TCGGGAAGTG GTCCGGGTGC AGGCGGCGGA CCTGTTCGCC GCCGGGGTCG ATCCGGTCGA GGTCGCCGGG CGGCTGCGGG TGAGTACGAA GTCGGCCTAC CAGTGGAAAC GGCTCTGGCA GGCCGGTGGC ACGGCGGCGC TGGCCTCACG AGGACCCAGT GGTGCGTCAT GCCGCCTGTC GGACAGTCAG CGTGACCGGC TACGGGTCGA ACTGGACCGC GGTCCGGCCG CGCACGGCTG GCCCGACCAG CGCTGGACCC TGGCCCGGGT GACCCTGCTG ATCGGCCGGC TGTTCCGCAC CCGCTACACC CTGCGCGGTA CGTCGTACCT GCTGCACCGC ATGGGTTACA GCCCTCAGGT CCCCGCCCGC CGGGCCACCG AACGCGACGA GGAGAAGATC ACCGCGTGGC GGGCCGAGAC CTGGGCGAAG GTACGAGGCT AG
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Protein sequence | MTRPCPTLVS GMRYADGGGL TAQGRARREV VRVQAADLFA AGVDPVEVAG RLRVSTKSAY QWKRLWQAGG TAALASRGPS GASCRLSDSQ RDRLRVELDR GPAAHGWPDQ RWTLARVTLL IGRLFRTRYT LRGTSYLLHR MGYSPQVPAR RATERDEEKI TAWRAETWAK VRG
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