| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4101 |
|---|
| Symbol | |
|---|
| ID | 3907065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4908450 |
|---|
| End bp | 4909724 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881429 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_483178 |
|---|
| Protein GI | 86742778 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA ACCGGCGCGT GGTGATCACC GGGATCGGAG TACGCGCACC CGGTGGCGGA
GGAGCCAAGA ACTTCTGGAA CCTTCTGACG GCCGGCCGGA CCGCGACCCG GCGGATTTCC
TTCTTCGATG CGGGGCCGTT CCGCAGCCAG GTGGCCGGTG AGGTCGACTT CGATGCCCAG
GCCGAAGGGC TGACCCCACG GCAGATCCGC CGGATGGACC GGGCGGCCCA GTTCGCGGTG
GTCTGCACCC GCGACGCGGT CGAGGACAGC GGTCTGGAGC TGGACCGGGT GGAACCCCAC
CGGATCGGGG TGAGCCTCGG CAGCGCTGTC GCGGCGGCTA CCTCTCTGGA AGCCGAGTAC
CTCGTGCTGT TCGACAGCGG CCGAACCCGC GAGATGGACA CCCGGCACCT GACGCCGCAC
ATGTTCGATC ACATGGTGCC CAGCGTGATG GCGGCCGAGG TGGCCTGGAC CGTCGGCGCG
GAGGGCCCGG TCACCATGGT CTCCGACGGG TGCACCTCCG GATTGGACGC GATCGGCCAC
GCGCTGCACC TCATCGAGGA CGGCGTAGTG GATGTGATGG CAGCGGGCGC GACAGACACT
CCGATCTCAC CCATCGTGCT GGCGTGCTTC GACGCCATCA AAGCCACCAC GTCGTACAAC
GACGAACCGG CGACGGCCTC GCGCCCGTTC GACCGATCGC GCAACGGCTT TGTCCTCGCC
GAGGGCTGCG CCATGTTCGT GCTCGAGGAG TACGAGCACG CCCGGCGTCG CAACGCCGAG
ATCTACGCTG AGGTCACCGG GTACGCCACC CGGTTGAACG CCTTCCACAT GACCGGTCTG
AAGCCGGACG GCAGGGAGAT GGCCGAGGCG ATCCGCACCG CGCTCGCCCA GTCCCGGCTC
GATCCGTCGG ACGTGGACTA CGTCAACGCG CACGGCTCGG GTACCAGACA GAACGATCTA
CACGAGACAG CGGCGGTCAA GGCCAGCCTC GGTGAGCACG CGCGTCGGGT GCCGATCAGC
TCGATCAAGT CGATGGTGGG CCATTCCCTG GGCGCGATCG GGTCCATCGA GGTGGCCGCC
TGCGCTCTCG CCTTGCGGTA CAGCGTCATC CCCCCGACCG CGAACCTACG GCTGCCGGAC
CCCCAATGCG ACCTAGACTA CGTGCCGCGC GTGGCCCGGG AGGCCACCCT CGACACGGTG
CTGACGATCG GCAGCGGGTT CGGCGGGTTT CAGAGCGCAA TGGTGCTTCG TCAGCCCGGA
GGACGGGCAG CATGA
|
|---|
| Protein sequence | MKPNRRVVIT GIGVRAPGGG GAKNFWNLLT AGRTATRRIS FFDAGPFRSQ VAGEVDFDAQ
AEGLTPRQIR RMDRAAQFAV VCTRDAVEDS GLELDRVEPH RIGVSLGSAV AAATSLEAEY
LVLFDSGRTR EMDTRHLTPH MFDHMVPSVM AAEVAWTVGA EGPVTMVSDG CTSGLDAIGH
ALHLIEDGVV DVMAAGATDT PISPIVLACF DAIKATTSYN DEPATASRPF DRSRNGFVLA
EGCAMFVLEE YEHARRRNAE IYAEVTGYAT RLNAFHMTGL KPDGREMAEA IRTALAQSRL
DPSDVDYVNA HGSGTRQNDL HETAAVKASL GEHARRVPIS SIKSMVGHSL GAIGSIEVAA
CALALRYSVI PPTANLRLPD PQCDLDYVPR VAREATLDTV LTIGSGFGGF QSAMVLRQPG
GRAA
|
|---|
| |