Gene Francci3_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4097 
Symbol 
ID3907061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4905009 
End bp4905941 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID637881425 
Productbeta-lactamase-like 
Protein accessionYP_483174 
Protein GI86742774 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCGA CTCGCGCCGC CGCCAGCGCG GTGGCGGCAC GTATGACGGA GGTGGCGGAC 
GGCGTGTTCG CCTATGTCCA GCCGGACGGA GGCTGGTGTC TCAACAACGC TGGCGTGGTG
GTGGGTGACG ACGGCATCCT GCTCGTCGAC ACCGCGGCCA CCGAGCGGCG CGCGACCTTG
CTGCGCACCG CAGTGGACGG CCTCAGTCGT GGCGGGGTGA AGTACTTGGT CAACACTCAT
TTCCATGGCG ACCACACCTT CGGCAATCAC CTTTTCGCCG ACACGGCGAC GATCATCGCC
CAGCACGGCA CCCGGGCCGA GATGGCGGAG ACGGGGCTGG CACTGACCGG CCTCTGGCCG
GAGGTGAATT GGGGCAATGT CGATCCGGTG CTACCGACGG TGACCTACCA CGACGCACTG
ACGCTGCACC TGGGCCGCTG CCGGGCCGAG CTTTTCAACG TGGGGCCCGC GCACACCGGG
CACGACACCG TGGTGTGGCT CCCCGGCGAG AAGGTGCTGT TCACCGGCGA CGTGGTGCTG
CCGGGGTGTA CGCCCTTCCT GTTGATGGGC ACGGTCGCGG GGTCGCTGAC CGCTGTCCGC
CGGATGCGCG AGACGGGTGC CCAAGTCGTG GTCGGCGGGC ACGGAACGAT CGCCGGCCCC
GAGGCCTTCG ACGAGACGGA GGCGTACCTA CTGTGGCTGC GGGACGCCGC CGGAGACGCG
ATGCGTAAGG GGCTGACACC GATCCAGGCG GCCCGCCAAT GCTCGGCAGG CCGATTCGCC
GGCTGGAAGG ACCCGGAGCG GCTGGTCCCC AACCTGCACC GCGCGATCGC CGAGCATCAG
GGGGCACCGC CGGCAGCCGC GCTGCCGGTC GAGCCGCTCT TCGCGGAAAT GGTGGAATTC
AACGGTGGGC ACCTCCCGGA GTGCCACGCC TGA
 
Protein sequence
MTATRAAASA VAARMTEVAD GVFAYVQPDG GWCLNNAGVV VGDDGILLVD TAATERRATL 
LRTAVDGLSR GGVKYLVNTH FHGDHTFGNH LFADTATIIA QHGTRAEMAE TGLALTGLWP
EVNWGNVDPV LPTVTYHDAL TLHLGRCRAE LFNVGPAHTG HDTVVWLPGE KVLFTGDVVL
PGCTPFLLMG TVAGSLTAVR RMRETGAQVV VGGHGTIAGP EAFDETEAYL LWLRDAAGDA
MRKGLTPIQA ARQCSAGRFA GWKDPERLVP NLHRAIAEHQ GAPPAAALPV EPLFAEMVEF
NGGHLPECHA