Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4083 |
Symbol | |
ID | 3907047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4892150 |
End bp | 4892860 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637881411 |
Product | transposase |
Protein accession | YP_483160 |
Protein GI | 86742760 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGAC GTCGTGCCTG TCCACCGGTC CCGACATCGG AGTTCGCCGG GTTCCGGTTC CCACCCGAGG TGATCATCCT GGCAGTCCGC TGGTACCTGC GGTACGCCTT GTCGTACCGT GACGTCGAGG AACTCCTCGC CGAACGCGGC ATCGACGTTG ACCACGTCAC GGTCTACCGG TGGGTGCGCC GGTTCACCCC GCTGCTTATC GACGCGGCCC GGCCATGCCG GCACACACCG GGTGATCGTT GGTTCGTCGA CGAAACGTAT GTGAAGGTCG CTGGACGATG GACCTATCTG TACCGGGCCG TCGACCAGTC CGGCCAGGTC ATCGACGTGC TGGCCTCCGA GAAGCGGGAC CTCGCCGCGG CCCGCCGGTT CTTCACCCGC GCCCTGTCCC ACGGCCGGCG GCCCGTCGAG GTGACCACCG ACCGGGCAGC CTTCTACCCA CGAGTCCTCG ACGAACAGCT CCCCGCCGCT CATCACGTCG ACGACCAGTA CGCGAACAAT CCGATCGAAG CCGACCACGG CCGGTTCACG GCACGACTAC GGCCGATGCG CGGCCTGAAA CGCCTCCGCT CCGCACAGAC CATCGGCTCC GGGCACACGT TCGTGCAGAA CATCCGCCGC GGCCACTACG AACTGGGCGT CGATGCCGAC CTCCGGAACC GGCTGACGGC TGCCTTCACC GAACTCACCC TGGCCATCTG A
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Protein sequence | MRRRRACPPV PTSEFAGFRF PPEVIILAVR WYLRYALSYR DVEELLAERG IDVDHVTVYR WVRRFTPLLI DAARPCRHTP GDRWFVDETY VKVAGRWTYL YRAVDQSGQV IDVLASEKRD LAAARRFFTR ALSHGRRPVE VTTDRAAFYP RVLDEQLPAA HHVDDQYANN PIEADHGRFT ARLRPMRGLK RLRSAQTIGS GHTFVQNIRR GHYELGVDAD LRNRLTAAFT ELTLAI
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