| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4063 |
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| Symbol | |
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| ID | 3907024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4861356 |
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| End bp | 4863140 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881392 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_483142 |
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| Protein GI | 86742742 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCTC CATCGTGGCG GCGCGCTTGG CGTAGCCACG TCTGGCTTGT CTATCTCTGT
CTCGGTCTGA TCGCCATCCT CGTCTACGGC CAGTTTCCCA CGACCGGCGG CCCACGTGCC
GTCCGGCTGG TCATCTACCT CTGCCTCAGC GCCTCGGCCG CGGGGGCCGT GTTCCTCGGC
CTGCGACGCC AGGAGTTGGC CGACCGACGT CCCTGGCTGC TGATCGGAAT CAGCCAGGTG
ATGTACGCCA TAGGCGATGG TGCCTTCTAC ATCTTTCACT ATGTGCTTGA CATCACAGAG
TATCCGGCCT TGCCGGATGT GTTATATCTG GGCCACTATC CGCTGTTCGT CGTCGGTCTC
GTTCTGCTGA CCCGGCGACG GACCCAGGAA CGGGACATCG CCGGCCTGCT CGACGGATCG
ATGTTCCTGC TCGCGGCGGT TCTGTTGTCC TGGCTCTACC TGATCGCGCC GCAGGTGCGT
GCGGACCATG ATCTGTTCGT CGGCGTCACC TCGGTGGCCT ATCCGGCGAT GGATCTGGCG
CTGCTGGGGG TGGCCATCCG TCTCGTGCTG GGGCACGGGA GCCGCCCACC CGCCTTCTTC
CTGTTGGCGG GCAATCTGCT CGCCAACCTG ACCGCCGACA CCATCTACGT CGTGCAGCAG
ACGAACGGGA CCTTCGAGGT CGGCAACTAC CTCGACGCGA TCTGGTTGAC AGGCAACCTC
GCCCTCGGCG CCGCCGGGTT GCATCCGACC ATGGTCGACC TCACGCGGCC GGCGTCCCCG
CGTGCGCAGG CGCGCAGCGG CCGGCGCCTG GTGGCACTGT CGAGTGCCGG GCTGGTGGCT
CCGACCGTGC TGGCCGTGCA GGTGATCCGT GGTGATCTAC GGGATCTGCT GGTCGCCGTG
GCCGTAAGTG CGATCATGAT GATTCTGATC ATCGTTCGGA TGGCGGGCCT GGAGGCCGAC
CAGCGGCGTC TGGCGATCAC GGACGGGCTG ACCGGCCTGC GTACCCGCCG CTATCTGGAG
ACCGAGATGA GGTTGGCGGC CGGTCGGGTA CGACGCACCG GATCCGGAAT GGGGCTGATC
CTCGTTGACG TCGACCACTT CAAGTCGGTG AACGACCGAT TCGGCCATCC GGCTGGTGAT
CAGGTGTTGA CGGAGGTGGC TCGGCGACTG CTGGTCGTGA CCCGTCCCGG TGACGTCGTC
GCCCGTTACG GGGGTGAGGA GTTCGCGCTG CTCACGCTGA ATGTCCGGGG AGACGCCCTC
GCCGATATCG CCGAACGTCT GCGCCGCGGC GTCGGACGAG AACCCGTCCG GATCGTCCTG
CCCGCGCCGC GAGTTCCGGA TCCGCCGGCC CGCACGGGGG AGTCCGGGGC TGCGGGGTCT
GCGGAGCCGA CGAGGGCGCG CGGCCAGGCC CGGTCGGGTG CCGGTGTCCG GGGAGACACC
GGCGAGGAGT CGCTGCTGAT CGCTGTGACG GTCTCGGTCG GAGCGGCGGC CCTCCCCGAT
CACGCGGACG ACACCTTCGC GCTCGTCGCA GCCGCGGATC GCGCGCTGTA CGCCGCCAAG
GCCGCGGGAC GGGACCGGGT CGCGGTCGGC TCCGCCAGAC CGGGCCATGA CGTCGGTGGG
CATGACGTCG GTGGGCATGA CGTCGGTGGG CATGACGTCG GTGGGCATGA CGTCGGTGGG
CATGACGTCG GTGGGCATGA CGTCGGCGAG AGGGTTGGTT CGAGTAGACA GCCCCCAGCC
CCGGATGCCG TATCCGCCGT GGTGTCCCGG CGTACGCGAT GGTGA
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| Protein sequence | MPAPSWRRAW RSHVWLVYLC LGLIAILVYG QFPTTGGPRA VRLVIYLCLS ASAAGAVFLG
LRRQELADRR PWLLIGISQV MYAIGDGAFY IFHYVLDITE YPALPDVLYL GHYPLFVVGL
VLLTRRRTQE RDIAGLLDGS MFLLAAVLLS WLYLIAPQVR ADHDLFVGVT SVAYPAMDLA
LLGVAIRLVL GHGSRPPAFF LLAGNLLANL TADTIYVVQQ TNGTFEVGNY LDAIWLTGNL
ALGAAGLHPT MVDLTRPASP RAQARSGRRL VALSSAGLVA PTVLAVQVIR GDLRDLLVAV
AVSAIMMILI IVRMAGLEAD QRRLAITDGL TGLRTRRYLE TEMRLAAGRV RRTGSGMGLI
LVDVDHFKSV NDRFGHPAGD QVLTEVARRL LVVTRPGDVV ARYGGEEFAL LTLNVRGDAL
ADIAERLRRG VGREPVRIVL PAPRVPDPPA RTGESGAAGS AEPTRARGQA RSGAGVRGDT
GEESLLIAVT VSVGAAALPD HADDTFALVA AADRALYAAK AAGRDRVAVG SARPGHDVGG
HDVGGHDVGG HDVGGHDVGG HDVGGHDVGE RVGSSRQPPA PDAVSAVVSR RTRW
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