| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4062 |
|---|
| Symbol | |
|---|
| ID | 3907023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4859665 |
|---|
| End bp | 4860735 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637881391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483141 |
|---|
| Protein GI | 86742741 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAACGC TCGAACCCAC CAGCCTCGAC CTCGACTCAA TCGAGGTCGA CAAACTCGCC
AAGGGCATCA CTCTGAGTCT GCTCATCCCG GCCCGTGGCC CGGAGGCGGC TCGAACTCTC
GGCGACATCA TCGCACTCAA CCGGCAACGC TGGATGCAGG AGCGTAGCGT GCTGGACGAG
ATCGGCGTGG TTGTCGACCC GTCGTCGGAC GGGGACGAAC ATGGCCTGAT GCGCATCGCG
ACCGACGCGG GCGCCAGCTG GGTCGTGCGT GGGGAGTCGG TCCTGCAGCG TCACGCGGGC
CGAGAGGCCA CCACGACCGG CGGCAAGGCG GGTGCGATGC GTAGTCTCGC CTATCTTGCG
TTCGGGAGTC GGCTCATCTT CCATGACGCC GATCTGGAAA GCTATGATCC ATATACAGTG
GGTGTCCTGG CTGCCGCCGC GACTGCCGAT AACGCCCCGC TTTTCGTCAA CGGAAGTTCG
CGTAGAGTGA CTGGCGACGG GCAGCCCGGG GGGCGAACCA CCGAGATGCT GCGGTCGCTG
TTGTCGAAAC AGCTCGCCAG GTATGTGCCG TCCATCACTC GGACAATCCA GCCGCTGATC
GGGGAGTTCG TCATCGACGC GGACGTCTTC GCGGCGCTGG CGTTCTCGCG GGGGTACGGC
GTCGAGACGT CACTGAAGGT TCTGGCTCTC GATCTGCTCG ACTACTCCGA TAGTCTCCAG
GTCGAACTAC CGATCAAGTA TCAGGTCGGC CAGCACTACC ACAGCCTGGT CAAACAGTTC
CATGAGATTA GTTTCACAAT CGATGTCCTG GAGGCGTACT TTCAGCGTCG GCGGGTCGAC
CCGCACGTCG CCATCTGGCA GATCGCCGAC AACTACGACC TGCTTTTCCC GGGTCGTACG
TATGCGTTGC ACCGGCCGCC GGGCTACGAC GACACCGACT TCGTTCCGCG GCTCGGCTTC
TACCAGCCGT TGGCCACGGC ACCGGCTTAT CAGGCGCGGT TGCCGGAGAT CAAGAGTACC
CGTCGGGTCG CGCTCGACGC ACTGGGGCGG CGAATGCGGA CCTCGGCCTG A
|
|---|
| Protein sequence | MRTLEPTSLD LDSIEVDKLA KGITLSLLIP ARGPEAARTL GDIIALNRQR WMQERSVLDE
IGVVVDPSSD GDEHGLMRIA TDAGASWVVR GESVLQRHAG REATTTGGKA GAMRSLAYLA
FGSRLIFHDA DLESYDPYTV GVLAAAATAD NAPLFVNGSS RRVTGDGQPG GRTTEMLRSL
LSKQLARYVP SITRTIQPLI GEFVIDADVF AALAFSRGYG VETSLKVLAL DLLDYSDSLQ
VELPIKYQVG QHYHSLVKQF HEISFTIDVL EAYFQRRRVD PHVAIWQIAD NYDLLFPGRT
YALHRPPGYD DTDFVPRLGF YQPLATAPAY QARLPEIKST RRVALDALGR RMRTSA
|
|---|
| |