| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4051 |
|---|
| Symbol | |
|---|
| ID | 3907012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4841637 |
|---|
| End bp | 4842482 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637881380 |
|---|
| Product | putative serine/threonine kinase anti-sigma factor |
|---|
| Protein accession | YP_483130 |
|---|
| Protein GI | 86742730 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.932154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGT CTTCGGTCCC GATGGATGTG GTACGGCAGG CAACGTCCAG TTGCCCACCC
GCAACCCACA TACTCGCCGA GCTCCCCTAT CTGCCCTCCG CCGTCCCGCA GGCCCGCAGG
GTGCTCCGCG AGGGCATCCG GCTGGCGGAC CTTCCCGAGG ACCTGCGCGG CACCGCCGAG
CTGCTCGTCA GCGAGCTCGT GACGAACGCG GTCAAATACG GGCAGCCGCC GCTGTGGCTG
CTTATCGAGA TACGGCCCGG TCTGATCCAC GCGTCCGTGT CGGACACCTC GACGGTTCTG
CCGCAGCGGC GTGAGGTCGC GCCGGACGCC GAGGGCGGTC GCGGCCTGCT GGTTCTCGAC
ACGTTGGCGG GCAGCTGGGG GACGGTGGCG GTCGAGTCAG GGAAGTACCT GTGGTTCGAC
CTGCCCGTGC CGGTTCCGCC GGCGCCGGTG GTGGGTCGGC GGTCCGCCTC CGTCCCCGAA
GCCGACGGCG CGGCCTCCCC GGGCGCCGGG AGCTCCTCGC TGCCCGAGGG GCCGTCGTCC
GCCGACGGGT CGTCACCCGC CGAACCCACC GAACCTACCG AACCCACCGA ACCCACCACT
GTGACCCGCT CTGCCCCGGC CGCCCGGTAC TCCCCACCGA TCCGTCCCGC GCCACGTCCC
CCGGCCGCCT CCGCATCGGC CCTGCTGTCG TCCGCCTTCG GGATGTCCCC CTTCCCGGTC
CTGTCGAGGC GGCCGGGATC GGACCGTGCC GGATCAGGCC GCACCGGAGC GGCACGCGCG
GGTTGGGAGG CGGCCCGGCC AAACGACGCC GAGGCGGCCG TCACGATCAT CACCAACGGC
CCCTGA
|
|---|
| Protein sequence | MSASSVPMDV VRQATSSCPP ATHILAELPY LPSAVPQARR VLREGIRLAD LPEDLRGTAE
LLVSELVTNA VKYGQPPLWL LIEIRPGLIH ASVSDTSTVL PQRREVAPDA EGGRGLLVLD
TLAGSWGTVA VESGKYLWFD LPVPVPPAPV VGRRSASVPE ADGAASPGAG SSSLPEGPSS
ADGSSPAEPT EPTEPTEPTT VTRSAPAARY SPPIRPAPRP PAASASALLS SAFGMSPFPV
LSRRPGSDRA GSGRTGAARA GWEAARPNDA EAAVTIITNG P
|
|---|
| |