Gene Francci3_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4042 
Symbol 
ID3907003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4827541 
End bp4827918 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID637881371 
Producthypothetical protein 
Protein accessionYP_483121 
Protein GI86742721 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTACCT ACCAGTACCG CTGCACCGAC TGCGGGCGTG ACCTTGAGGC CGTACAGAGC 
TTCAGCGACG TATCACTGAC GGAGTGCCCG GCCTGCGCCG GACGACTTCG TAAAGTGTTC
GGTTCGGTGG GCGTGGTGTT CAAGGGCAGC GGCTTCTACA AGAACGACAG CCGGTCCAAC
TCCTCCGGCG GGTCCACGCA GCACCGCCCC AAGGACGTCG GCGACGCCAC GGCCACGGGT
GGCAGCAGCG AGGCGACATC CGGGGGGAGC ACCAACAGCT CCGTCAGCTC GGACTCGTCG
TCCTCGACCT CGTCGGGCGG CACCGCCACG GCCTCCTCGA CGACGTCGAC TCCGGCCTCC
AGCACCGCGG CGGCCTGA
 
Protein sequence
MPTYQYRCTD CGRDLEAVQS FSDVSLTECP ACAGRLRKVF GSVGVVFKGS GFYKNDSRSN 
SSGGSTQHRP KDVGDATATG GSSEATSGGS TNSSVSSDSS SSTSSGGTAT ASSTTSTPAS
STAAA