Gene Francci3_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4036 
Symbol 
ID3906997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4821815 
End bp4822447 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID637881365 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_483115 
Protein GI86742715 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.357695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGCTC CGGGTTGGCC GGCAGTCCTG ACTGACGGAC GGGTCCAGGT GCGGCCGCTT 
CGTCTGCGTG ACGCCTCCAC GTGGGTCGAG GTGCGGCTGC GCAACGCCGA CTGGCTGGCG
CCGTGGGAGG CGACCCCACC CGGAGTGATG ATGGTCCGCG AGACCTGGGC GCAGCGCCAG
ACCCTCTCGA TCTACCGTCA GATGTGGCAC CGCCTGCGCC AGCAGGCCCG GCTCGGCGCC
ACGTTGCCGT TCGCGATCAC CTTCGAGGGG CGGCTCGTCG GTCAGGTGAC CGTGTCCACA
ATCGTGCGCG GGGCGTTCAA CAGCGCTCAG GTCGGCTATT GGATCGACAG CGAGTACGCC
GGTCGAGGCA TCACGCCGAC CGCGCTCGCG CTCGTCGTCG ACCACTGTTT CGGGCCGGTC
GGGCTGCACC GGGTGGAAGC GAATGTGCGC CCGGAGAACG CCGCGAGCCG GCGGGTGCTC
GCGAAGCTCG GTTTCCGCGA GGAGGGGCTG CACCGGCACT TCCTTGCCAT CGACGGCCGC
TACCACGACC ACATCGGATT CGCGCTGACG ACCGAGGACG TCCCCGAGGG CCTGGTGCAC
CGCTGGCGGG AGACCCGGTA CAGCCGGCCC TGA
 
Protein sequence
MGAPGWPAVL TDGRVQVRPL RLRDASTWVE VRLRNADWLA PWEATPPGVM MVRETWAQRQ 
TLSIYRQMWH RLRQQARLGA TLPFAITFEG RLVGQVTVST IVRGAFNSAQ VGYWIDSEYA
GRGITPTALA LVVDHCFGPV GLHRVEANVR PENAASRRVL AKLGFREEGL HRHFLAIDGR
YHDHIGFALT TEDVPEGLVH RWRETRYSRP