| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4026 |
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| Symbol | |
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| ID | 3906987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4812352 |
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| End bp | 4814061 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637881355 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_483105 |
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| Protein GI | 86742705 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGA CTGCCGCGAC CGAGACCTAC CGCACTGCCC GCGATCTTCT GATCAACTTG
CGCACGGACT ACGGCAAGGC GCTGGAGGAG TTCCGCTGGC CACGGTTCGA AGGCCAGTTC
AACTGGGCCA TCGACTGGTT TGACCCAATC GCCCGGAACA ACGACCGGGT GGCGCTGTGG
ATCGTGGAAG AGGATGGTTC GGAACGTCGG TGCACCTATG ACGAGATGGC CCGTCGCTCG
GACCGGGTAG CGACCTGGCT TGCCGGGTTA GGCATCGGCA AGGGCGATCC GGTGATCCTC
ATGCTCGGCA ACCAGGTGGA GCTCTGGGAG TCGATGCTGG CGCTCATGAA GCTGGGCGCG
GTAATCATAC CCACCACTAC CGCGATCGGT CCGACGGACC TCGCCGACCG GATCGAACGC
GGCGGCGCCA CCTGCGTGAT CGCCAATGCC GCCGACGCGG TGAAGGTCAA GCTGAAAAAC
CTGAACGGTG TCATTGTAGG TGGCGAGGCC GCCGGCTGGC GCCCCTACAC CGAGGCCAAC
GGCGTCACCG AGGTGCACCG GTTCGAATCC CGTACCGCCC CCACCGATCC GCTGCTGTTC
TACTTCACCT CCGGAACCAC CAGCCGGCCC AAACTCGTCG AGCACAGCCA GGTGTCCTAT
CCGGTCGGGC ACCTGTCCAC CCTGTACTGG ACCGGGGTGC AACCCGGTGA CGTGCATCTC
AACATCAGTT CCCCTGGCTG GGCAAAGCAC GCGTGGAGCT CGTTTTTCGT GCCGTGGATC
GCCGAAGCAA CGATCTTCGT CTACAACTAC GGCACGTTCG ACCCCGCCAA GCTGCTGGCG
CAGCTCCGCC GGGCTGGCGT AACCACGATG TGCGCGCCGC CGACCGTGTG GCGCATGCTC
ATCAAGGTCG ATCTTTCCGG CGGGCCCGGC GCGCTGCGCG AGGTGCTGTC GGCCGGTGAA
CCCCTCAATC CGGAGGTCAT CGACCAGGTC CGCGCCCACT GGGGCCTGAC CCTGCGCGAC
GGGTTCGGCC AAACCGAGAC GACCGCCCAG GTCGGCAACT CACCTGGCGC CGCCGTCAAG
CCGGGGTCGA TGGGCCGTCC GCTGCCGGGC GTGCCCACGG TCCTGGTCGA CCCGGTGAGC
GGCCAGCGCT CCAGCACTGA GGGAGAGCTG TGCCTCGATC TGGCCGCGCA CCCGCTCGCG
CTAATGACCA GTTACCGTGG CGACCCCGAA CGCAACGCGG AAGTACTGGC CGGCGGCTAC
TACCACACCG GTGACGTCGC ATCCCTCGAC GAGGACGGCT ACCTCACCTA CATCGGCCGT
ACCGACGACG TGTTCAAGGC CTCGGACTAC AAGGTGTCCC CCTTCGAACT GGAAAGCGTC
CTCGTCGAAC ACCCGGCTGT GCTCGAGGCA GCCGTCGTGC CCGCACCCGA CGAGGTACGC
CTGGCCGTGC CGAAGGCCTA CATCGCACTT GCTCCGGGAT GGGAGCCGAA CCGCGAGACA
GCGGAGGCGA TCCTCCGTCA CGCCCGCGAA AACCTTGCCC CCTACCTGCG CGTCCGGCGG
CTGGAGTTCT ACGACCTACC CAAAACGATC TCCGGCAAGA TCCGGCGCGT CGAGCTGCGC
AGCAGGGAGA GCGAAGCCGC GGGCACCCGC CTCAGCATGG AGTACCGCGA CACCGACTTT
CCCAGGCTGA CCAGCCGTAA GGCCGACTGA
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| Protein sequence | MTSTAATETY RTARDLLINL RTDYGKALEE FRWPRFEGQF NWAIDWFDPI ARNNDRVALW
IVEEDGSERR CTYDEMARRS DRVATWLAGL GIGKGDPVIL MLGNQVELWE SMLALMKLGA
VIIPTTTAIG PTDLADRIER GGATCVIANA ADAVKVKLKN LNGVIVGGEA AGWRPYTEAN
GVTEVHRFES RTAPTDPLLF YFTSGTTSRP KLVEHSQVSY PVGHLSTLYW TGVQPGDVHL
NISSPGWAKH AWSSFFVPWI AEATIFVYNY GTFDPAKLLA QLRRAGVTTM CAPPTVWRML
IKVDLSGGPG ALREVLSAGE PLNPEVIDQV RAHWGLTLRD GFGQTETTAQ VGNSPGAAVK
PGSMGRPLPG VPTVLVDPVS GQRSSTEGEL CLDLAAHPLA LMTSYRGDPE RNAEVLAGGY
YHTGDVASLD EDGYLTYIGR TDDVFKASDY KVSPFELESV LVEHPAVLEA AVVPAPDEVR
LAVPKAYIAL APGWEPNRET AEAILRHARE NLAPYLRVRR LEFYDLPKTI SGKIRRVELR
SRESEAAGTR LSMEYRDTDF PRLTSRKAD
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