Gene Francci3_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4018 
Symbol 
ID3906979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4804852 
End bp4805436 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID637881347 
Producthypothetical protein 
Protein accessionYP_483097 
Protein GI86742697 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTC CAGGCTGGAA TCAGGCCAAG ATGAGGGCGC TCGCCGCCGA AATCCGCGTC 
GAAATGGGCA TCGGATCCTT CGACCGACTC GACCCTTACC GGATCGCGGA GGAGTACCGA
GTCCCCGTCT ACCCACTGCA AGAACTAGGA GACCACCGCG GCCAGTGCTC CGAAGCGGCG
ATCGCGCACT TCACCGTCAC CCGGCGAACG AAGTGGTCGG CGGCCCTCGT CGCCGCGGGC
TCCAACCGGA TGATCATCGA GAACGCGGCA CACGAGGAGG TGCGGCGTCG CTCGAACCTC
GCCCACGAGA TCTCGCACCT TCTCCTTGAA CACGAGTTCG ACACCCTTCT TCTCACGGAC
GACACCACCT GCTTCACGGA TGAGAAGAAG GAGAAGGAGG CCCAGTTTCT CGCTCGCGAA
CTCCTCATCT CGGAGCAAGC GGCGAAACAG GCAGCCTTCA AAAGGCTCAC CAACGAGGAG
GTCGGAGCCC TCTACGACGT CAGTTCCCAG TTTGCGCAGT GGAGGATGTC GGGGCCACGC
GTCTACGCAC AACGTTCTCT CGCGCGCCAG AACGGGACCT CCTGA
 
Protein sequence
MARPGWNQAK MRALAAEIRV EMGIGSFDRL DPYRIAEEYR VPVYPLQELG DHRGQCSEAA 
IAHFTVTRRT KWSAALVAAG SNRMIIENAA HEEVRRRSNL AHEISHLLLE HEFDTLLLTD
DTTCFTDEKK EKEAQFLARE LLISEQAAKQ AAFKRLTNEE VGALYDVSSQ FAQWRMSGPR
VYAQRSLARQ NGTS