Gene Francci3_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3984 
Symbol 
ID3906944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4767649 
End bp4768056 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content71% 
IMG OID637881312 
ProductTOBE 
Protein accessionYP_483063 
Protein GI86742663 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3585] Molybdopterin-binding protein 
TIGRFAM ID[TIGR00638] molybdenum-pterin binding domain
[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0770501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAT TCCGGATCAG CGAGGCCGCC GCGCTGCTCG GTGTCAGCGA CGACACCATC 
CGCCGGTGGG CGGACAGCGG CCGACTGCCA ACCGTCCTGG ACGACGCCGG CCGCCGGGCG
ATCGAAGGCG GCACCCTGGC CGGATTCGCC AAGGATCTGG CGACCGAGCA GACCGCCGCC
CAGACGCCGG TCGTCGCCGA ATCCGCGCGT AACCGCTTCC CCGGGATTAT CACCCGCGTG
GTGCGCGACA CGGTGATGGC CCAGGTCGAG ATCCAGGCCG GCCCGCATCG CCTGGTCTCG
CTCATGAGCC GGGAGGCCGC CGACGAACTC GGGCTGGAAG CCGGCGTCCT CGCGGTCGGC
GCGGTGAAGT CGACCAACGT CGTCATCGAG CTTCCCGAGC GTCGTTGA
 
Protein sequence
MPRFRISEAA ALLGVSDDTI RRWADSGRLP TVLDDAGRRA IEGGTLAGFA KDLATEQTAA 
QTPVVAESAR NRFPGIITRV VRDTVMAQVE IQAGPHRLVS LMSREAADEL GLEAGVLAVG
AVKSTNVVIE LPERR