| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3972 |
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| Symbol | |
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| ID | 3906932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4752239 |
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| End bp | 4754023 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881300 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_483051 |
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| Protein GI | 86742651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.855212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CCGACTATCC GCCCATCGAA GAGCACGCGG TCATCGGCGA CCTGCGTACC
GTGGCCCTGG TCGCCACGGA CGGCACGATC GACTGGTACT GCCCGCAGCG CTTCGACGCG
CCGTCGGTTT TCGCGAGTCT GCTGGACGCC GACCGTGGCG GATCGTTCCG TATCCACTGT
CCGGACTCCC GGGCCAGGCA GCTCTACCTC CCCGACTCGA ACATCCTGAT GACCCGTTTC
CTCGCCCCCC GCGCGGTCGG TGAGGTCATC GACTTCATGG TCCCGGTGGA CAGCGACGTC
ACCGAGACAC CGCACGTCGT GGTCCGCCAG GCCCGAGCGG TGCGTGGAAC CGCCACGTTC
CGGCTGCGCT GCGACCCCCG GTTCGACTAC GGCCGGGCCC CGCACACCGT CACCCTGGTG
CCTGGTTCGG GCGCGGTGTT CGAGTCGACC GCCGGCACCC TTGTGCTGCG CACGGCCCTG
CCGCTGCGCG TCGAGGCCAC GGCCGTGGTC GCCGAGTTCG AGCTGGCGAT GGGCGAGTGT
GCCGACATCG TGCTCGAATG GAACTCGACC ATCCGCCCAT TGATCATCGG CGAGGCGGAG
ACGTTGTTCA CCCGGACGCT GAACTACTGG CAGGCCTGGA TCCGGCGCGG GCGCTATCAC
GGCCGGTGGC GGGAGATGGT GCTACGCAGC GCTCTCGTCC TCAAACTGCT CGTCTACCGG
CCCACCGGGG CGCTGGTGGC CGCGCCGACC ACCTCGCTAC CCGAGGAGCT CGGCGGCGTG
CGCAACTGGG ACTACCGCTA CACCTGGATC CGCGACGCGG CCTTCACGGT GTACGCGCTG
ATGGCGCTCG GATTCACCGA CGAGACCGCG GCGTTCATGG ACTGGCTCGA ACAGCGATGT
CACGAGGCAC CCAAGCACTG CGGGCTCTAC GTGCTCTACA GCGTGGACGG CAACGCCGAC
CTGGACGAGC TGGTCCTCGA CCAGCTGTCC GGCTATCGCG GCTCGAAGCC GGTGCGCATC
GGCAACGCCG CCGCCACGCA GCTCCAGCTC GACATCTACG GCGAGCTGAT GGACTCGGTG
TACCTGTACA ACAAGCAGGT CCCGATCTCC TTCCAGCTCT GGGAGGCGCT GGGCCGCCAG
CTCGACTGGC TGGCCAGGCA CTGGGACGAA CCGGACGAGG GCATCTGGGA GACCCGGGGT
GGGCGCCAGC GCTTCACCTA CTCGGCCGTG ATGACCTGGG TCGCCTTCGA ACGGGCCTGC
CGGATCTCGC GCCAGCGCGG CCTGCCCGGG CCGACGAACG AATGGAAGGA CTACGCCGGG
CGGGCCTACC GGTTCGTCCA GAACGAGGCG TGGAACCCCG CCCGCGGCGC CTACATGGAG
TTCCCCGGCT CACCACGGAT GGACGCATCC CTGCTGTGCA TGCCGCTGGT GAAGTTCTCC
GGCCCCACCG ACCCCCGGTT CCTGTCGACC CTGGAACGGT TCAGCGGGGA CCTGGTCAGC
GACAGTCTGG TGCGCCGGTA CGCCGCGGAC GGCAGCGACG GCCTCACGGG TGACGAGGGC
ACCTTCAACC TGTGCTCGTT CTGGTACGTG GAGGCACTGA CCCGGGCCGG TCGGGTCGCC
GAGGCCCGGA TGGTCTTCGA GAAGATGCTC ACCTACGCCA ACCATGTGGG GCTCTACGCC
GAGGAGATCG GTTCCTCCGG GGAAGCGCTC GGCAACTTCC CGCAGGCGTT CACCCACCTC
GCCCTGATCA GTGCCGCGAT CCATCTCGAC CGCGCGCTGG GGTGA
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| Protein sequence | MPDTDYPPIE EHAVIGDLRT VALVATDGTI DWYCPQRFDA PSVFASLLDA DRGGSFRIHC
PDSRARQLYL PDSNILMTRF LAPRAVGEVI DFMVPVDSDV TETPHVVVRQ ARAVRGTATF
RLRCDPRFDY GRAPHTVTLV PGSGAVFEST AGTLVLRTAL PLRVEATAVV AEFELAMGEC
ADIVLEWNST IRPLIIGEAE TLFTRTLNYW QAWIRRGRYH GRWREMVLRS ALVLKLLVYR
PTGALVAAPT TSLPEELGGV RNWDYRYTWI RDAAFTVYAL MALGFTDETA AFMDWLEQRC
HEAPKHCGLY VLYSVDGNAD LDELVLDQLS GYRGSKPVRI GNAAATQLQL DIYGELMDSV
YLYNKQVPIS FQLWEALGRQ LDWLARHWDE PDEGIWETRG GRQRFTYSAV MTWVAFERAC
RISRQRGLPG PTNEWKDYAG RAYRFVQNEA WNPARGAYME FPGSPRMDAS LLCMPLVKFS
GPTDPRFLST LERFSGDLVS DSLVRRYAAD GSDGLTGDEG TFNLCSFWYV EALTRAGRVA
EARMVFEKML TYANHVGLYA EEIGSSGEAL GNFPQAFTHL ALISAAIHLD RALG
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