| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3958 |
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| Symbol | |
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| ID | 3906917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4735611 |
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| End bp | 4736642 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637881285 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_483037 |
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| Protein GI | 86742637 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.604239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGCCC CCGCCAAGGT CAACCTGCAT CTCGGCGTCG GACCGCTCCG ACCGGACGGC
TACCACGACG TCATCACAGT GCTGCAGGCC GTCTCGCTGT TCGACGACGT CTCGGCGACG
TCCGTCGATC CCCCGCGGTT CCACGACCCG GGGCCATCGA CCACCGACGG GAACGGCGGG
TCCGACGGGA ACGGCCGGTC CAGCGGGGAC ATCGTCGTGA CCGTCGAGGT GTCCGGGGAG
GGCGCCGACC CGGCGTCGCT GGGTCCGGCG ACGTCCACGC CGGAGGTCTC CATCGTCCCC
ACCGGCCGGG ACAACATCGC CGTCCGGGCC GCTCACCTGG TTGCCGAGGC CGCGGGCATC
ACCTCGGAAC GGGTTCATCT CACCCTGACG AAGGGCATCC CCGTCGCCGC GGGGATGGCC
GGGGGCAGCG CCGACGCGGC GGCGGCGCTC GTCGCCTGCG ACGCGCTCTG GCAGACCGGC
CTGGACCGGG CGACCCTGAC CCGACTCGCC GCCCAGCTCG GCAGCGACGT CCCGTTCCCC
CTGGCCGGCG GCACCGCACT CGGCACCGGG CGCGGCGAGC AGCTCACCGA CGTCCTGGCG
ACGGGCGAGT ACTACTGGGT GTTCGCGCTC GCCGACGGCG GCCTGTCCAC CCCCGCGGTC
TACAAGGAGT TCGACCGGCT GACCGAGGGC AAACTGCGGA CCGGCCCGAC CCCCGCCGAC
GACGTGCTCG CCGCGCTGCG CACCGGCGAC CCCGGCCAGC TCGGAGCCGC CCTGGTCAAC
GACCTGCAGC CGGCAGCACT GCGGCTTCGG CCGTCCCTGC GCCGCGTCCT GGAGGCGGGC
CGGGAGCTGG GAGCCGTCGG GGCGATCGTG AGCGGCTCCG GCCCGACCTG CGCCTTCCTC
ACGGCCGGAG CGCAGGAGAG CATCGCGCTC GCGGCGAGCC TCGCCGGGAT GGGGGTCGCC
CGCGCGGTAC GCCGGGCCTC CGGGCCGGCG AGCGGCGCCA GGATGGTGGA GGGAGCAGGC
GAAGCGCCGT GA
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| Protein sequence | MRAPAKVNLH LGVGPLRPDG YHDVITVLQA VSLFDDVSAT SVDPPRFHDP GPSTTDGNGG
SDGNGRSSGD IVVTVEVSGE GADPASLGPA TSTPEVSIVP TGRDNIAVRA AHLVAEAAGI
TSERVHLTLT KGIPVAAGMA GGSADAAAAL VACDALWQTG LDRATLTRLA AQLGSDVPFP
LAGGTALGTG RGEQLTDVLA TGEYYWVFAL ADGGLSTPAV YKEFDRLTEG KLRTGPTPAD
DVLAALRTGD PGQLGAALVN DLQPAALRLR PSLRRVLEAG RELGAVGAIV SGSGPTCAFL
TAGAQESIAL AASLAGMGVA RAVRRASGPA SGARMVEGAG EAP
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