| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3957 |
|---|
| Symbol | |
|---|
| ID | 3906916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4734700 |
|---|
| End bp | 4735185 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637881284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483036 |
|---|
| Protein GI | 86742636 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1302] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.951058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CAACCAGCGC GGCCGGGCCC GAGGCGAAGG CCTCGGACGC AGGTGGTGCG
CGTCGCACCA CCGTGCCGGA GCGCAAGACA TCCACCGAGC TGGTGACCGG CCGGGGCCGG
ACGTCGATCG CGGACGCCGT CGTCAGCAAG ATCGCCGGTG TCGCGGCACG CGAGGTCTCC
GGGGTACACA ACCTGGGCTC GAGCGGGGCC CGCGCGATGG GTTCGTTCCG GGCCCGCATC
CCCGGCGCGT CGGCCAGCGT CTCCCAGGGG GTCGCGGTGG AGGTCGGGGA ACGGCAGGCC
GCGATCGACC TCGACGTCGT CTGCGACTAC GGGGTCTCCA TCGTGGATCT GTCCCACTCG
ATCCGGCACA ACGTCGTCAC CTCTGTGGAG GGAATGACGG GCCTGGAGGT CACCGAGGTG
AACATCGCGA TCGACGACGT CTACATCGGC GAGGAGGAGT CGGAAGAGCC GCGGCGGGTC
GAATGA
|
|---|
| Protein sequence | MTTTTSAAGP EAKASDAGGA RRTTVPERKT STELVTGRGR TSIADAVVSK IAGVAAREVS
GVHNLGSSGA RAMGSFRARI PGASASVSQG VAVEVGERQA AIDLDVVCDY GVSIVDLSHS
IRHNVVTSVE GMTGLEVTEV NIAIDDVYIG EEESEEPRRV E
|
|---|
| |