| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3941 |
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| Symbol | |
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| ID | 3906900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4718124 |
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| End bp | 4719152 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637881268 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_483020 |
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| Protein GI | 86742620 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.438556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGC TCGTGACGGG CACGGAGGGG TATCTGGGGT GCCTGCTCGC GCCCGAGCTG
CTGCGTGATG GCCATGAGGT CATCGGCGTG GACACCGGCT ACTACAAGTA CGGCTGGCTG
TACCGCGGCG TCGACCGGAC CCCGTTGACC CTTGACAAGG ACCTTCGCCA TCTCACGGTC
GAGGACTTCG CGGGGGTCGA CGCCGTCGTG CACATGGCGG AGCTGTCCAA CGACCCGCTC
GGCGCGCTCG CCCCGGACGT GACGTACAAG GTGAACCACG TCGGCTCGGT CCGGCTGGCG
AAGCTGGCCA AGCAGGCCGG CGTCGAACGG TTCGTCTACA TGTCCTCCTG CAGCGTCTAC
GGCGTCGCGA CCGGTGTGGA CGTCACCGAG GCCTCGCCGG TGAACCCGCA GACCCCCTAC
GCCGAGTGCA AGGTCTACGT GGAGCGTGAC GTCGCCCCGC TGGCGGACGA CACCTTCTCG
CCGACCTTCC TGCGCAACGC CACCGCCTAC GGTGCCTCCC CGCGGCAGCG TTTCGACATC
GTGCTCAACA ACCTGGCCGG GGTGGCCTGG ACTACCGGCG AGATCGCGAT GACCTCGGAT
GGCACCCCGT GGCGCCCGCT GGTCCACGGG CTCGATATCG CGAAGGCGAT CCGCCTGGTG
CTGACCGCAC CGCGCGACAT CGTGCACAAC CAGATCTTCA ACGTCGGCGA CAGCGAGCAG
AATTACCAGG TGAAGGAGAT CGCGGACGCG GTCGCCACGG TGTTCACCGG CTGCACGCTG
AGCTTCGGTG ACAACGGCGG TGACAATCGC AGCTACCGGG TGTCGTTCGA CAAGATCGCC
TCCACCCTGC CCGGCTTCTC CTGTGACTGG AACGCGCTCA GGGGCGCCCA GCAGCTGCAC
GACGTCTTCA CCCGTATCCA GCTCGACAAC GAGACGTTCA CCGGCCGCGG GCACACCCGG
CTCAAGCAGC TTCAGTACCT GATCCGCACC GGCCAGCTCG ACGCCGACCT GTTCTGGGCC
CACTCGTGA
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| Protein sequence | MKVLVTGTEG YLGCLLAPEL LRDGHEVIGV DTGYYKYGWL YRGVDRTPLT LDKDLRHLTV
EDFAGVDAVV HMAELSNDPL GALAPDVTYK VNHVGSVRLA KLAKQAGVER FVYMSSCSVY
GVATGVDVTE ASPVNPQTPY AECKVYVERD VAPLADDTFS PTFLRNATAY GASPRQRFDI
VLNNLAGVAW TTGEIAMTSD GTPWRPLVHG LDIAKAIRLV LTAPRDIVHN QIFNVGDSEQ
NYQVKEIADA VATVFTGCTL SFGDNGGDNR SYRVSFDKIA STLPGFSCDW NALRGAQQLH
DVFTRIQLDN ETFTGRGHTR LKQLQYLIRT GQLDADLFWA HS
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