| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3940 |
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| Symbol | |
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| ID | 3906899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4717498 |
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| End bp | 4718127 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881267 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_483019 |
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| Protein GI | 86742619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.302103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.239102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATTA CGCCGACGCC GATCGCCGGG GTGATGATCG TCGATGTCGA GCCGTTCCCC
GATGCCCGCG GCATGTTCGC GCGCACGTTC TGTGCCGACG AGTTCGCCGC CGCGGGGCTC
ACGGTCGACG TCGCCCAGTG CAGCGTGGCC TACAACGCCT CCGCGGGCAC CGTCCGCGGG
ATGCACTGGG CGGGGGAGCC GGTGCGGGAG ACCAAGCTGG TGCGCTGCAC CCGCGGCGCC
CTGCTCGACG TCGTCGTCGA TCCCCGCCCG GACTCGCCGA CCTATCTGCG GCACGTGGCG
GTGGAGCTCT CGGCCGACAA CCATCGGGCG CTGTTCATCG ACGCGGGCCT GGCGCACGGG
TACCAGACGC TCGTCGACTC CACCGAGGCG ACCTATCAGA TGAACGTCCC GTTCACGCCG
GGACACGACC GTGGGCTGCG CTTCGACGAC CCGCGACTGG GCATCGTCTG GCCGCTGCCC
GTCTCGGTGA TCTCCGACAA GGACCGTGCG TGGCCGCTGC TGGCCGGCGA TGGCCCGGCC
GGACCATCCG GCGACGCCGC GCCACCCGGC CCTCCCGGCA TCCAACGTGA TGTAGCTCAC
GCATCCGGCG GGGTCGGCGC GACGGCCTGA
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| Protein sequence | MIITPTPIAG VMIVDVEPFP DARGMFARTF CADEFAAAGL TVDVAQCSVA YNASAGTVRG
MHWAGEPVRE TKLVRCTRGA LLDVVVDPRP DSPTYLRHVA VELSADNHRA LFIDAGLAHG
YQTLVDSTEA TYQMNVPFTP GHDRGLRFDD PRLGIVWPLP VSVISDKDRA WPLLAGDGPA
GPSGDAAPPG PPGIQRDVAH ASGGVGATA
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