Gene Francci3_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3923 
Symboleno 
ID3906882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4690449 
End bp4691732 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content70% 
IMG OID637881250 
Productphosphopyruvate hydratase 
Protein accessionYP_483002 
Protein GI86742602 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.273888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCTA TCGAGGCCGT CGGAGCCCGC GAGATCCTTG ACTCGCGCGG TAACCCCACC 
GTCGAGGTCG AGGTCGTCCT GGAGGACGGC ACGCTGGGCC GCGCCGCGGT GCCCAGCGGG
GCGAGCACCG GTGCCTTCGA GGCCGTCGAG CTGCGCGACG GGGACAACCG CTATGGCGGC
AAGGGCGTGA CCAAGGCCGT GGCCGCGGTG ATCGACCGGA TCGGTCCGGC GATCATGGAG
TTGGAGGCCA CCGAGCAGCG TCTTCTCGAC GCGACGCTCA TCGACCTCGA CGGCACCCCG
GGCAAGTCGG CCCTCGGCGC CAACGCCCTG CTCGGGGTCA GCCTGGCGGT GGCCAAGGCG
GCGGCGGCGT CGAGCGGCCT GCCGCTGTTC CGGTACCTGG GAGGTCCGAC CGCGCACCTG
CTCCCGGTGC CGATGATGAA CATCCTCAAC GGTGGTGCGC ACGCCGACAC CAACGTCGAC
ATTCAGGAGT TCATGATTGC TCCGATCGGC GCGAGCACCT TCGCCGAGTC GCTGCGCTGG
GGTGCGGAAG TCTATCATGC GCTCAAGAGC GTGCTGAAGG CGCGGGGCCT GGCGACCGGC
GTGGGCGACG AGGGCGGCTT CGCGCCGAGC CTGCCCACCA ACCGGGAGGC TCTCGACCTC
ATCGCCGAGG GGATCGACAA GGCCGGCTTC GCCCTGGGGA CGGACATCGC CCTGGCGTTG
GACGTTGCCT CCACCGAGTT CTACGCGGAC GGGTCGTACA CCTTCGAGGG CAACTCGCGT
AGCGCCGAGT ACCTGAGCGA CTACTATGCC GAGCTCGTCT CCGCCTACCC GATCGTCTCC
ATCGAGGACC CGCTGGCCGA GGATGACTGG GATGGCTGGG TGGCGCTCAC CGAGCGGCTC
GGTGGCAAGG TGCAGCTCGT CGGGGACGAC TTGTTCGTGA CCAACCCGGA GCGGCTGGCT
CGCGGGATCG CCTTGAAGGC CGCAAACGCC CTGCTGGTGA AGGTGAACCA GATCGGCACG
CTGACCGAGA CGCTCGACGC GGTGAACCTG GCCCACCGTA GCGGCTACCG GGCAATGATG
TCCCACCGGT CCGGCGAGAC CGAGGACACC ACCATCGCCG ACCTCGCCGT CGCGGTCGAC
TGCGGTCAGA TCAAGACCGG CGCCCCGGCG CGCTCGGAGC GGGTCGCGAA GTACAATCAG
CTGCTGCGCA TCGAGGAGGA ACTCGACGAC GCGGCCCGGT ACGCGGGCGC CGCCGCGTTC
CCCCGCCGCA GGCAAGCCGG CTGA
 
Protein sequence
MPSIEAVGAR EILDSRGNPT VEVEVVLEDG TLGRAAVPSG ASTGAFEAVE LRDGDNRYGG 
KGVTKAVAAV IDRIGPAIME LEATEQRLLD ATLIDLDGTP GKSALGANAL LGVSLAVAKA
AAASSGLPLF RYLGGPTAHL LPVPMMNILN GGAHADTNVD IQEFMIAPIG ASTFAESLRW
GAEVYHALKS VLKARGLATG VGDEGGFAPS LPTNREALDL IAEGIDKAGF ALGTDIALAL
DVASTEFYAD GSYTFEGNSR SAEYLSDYYA ELVSAYPIVS IEDPLAEDDW DGWVALTERL
GGKVQLVGDD LFVTNPERLA RGIALKAANA LLVKVNQIGT LTETLDAVNL AHRSGYRAMM
SHRSGETEDT TIADLAVAVD CGQIKTGAPA RSERVAKYNQ LLRIEEELDD AARYAGAAAF
PRRRQAG