Gene Francci3_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3892 
Symbol 
ID3906660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4655375 
End bp4656538 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID637881218 
Producthypothetical protein 
Protein accessionYP_482971 
Protein GI86742571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGC TCTGGGAAGG TTCAGAAAAA GTGAGTGCAG GGGAAAGCTG CGGCGAGGAG 
GGGCCTACGG GCCCCCAACC CGAGGTGCAC GCGCTGTTCC CGTCCTGCGG CGAGTGCCGG
AGGGCGCGCG CGGAGCATCT GCGCCGGTCC GCGCGCGGGG CGCGGATGCG CGACGGGCTG
CCCAGCCTGA CTCTCCAGCC GCCGGTGACG CGCTGCCCGC ATATCCCGGA CGTGTGGGCG
CCGGGATTCG GCCCGGGTCG GAGCCGCCGG AGGGCTCCGG GTGGGAGACG CGGCCGGAGG
GCCCGGTCTG ACCCCCGCCT GGTTCAGCCA GCTTGTCCCC GGTGGGCGGA TGGTCCTGCC
GTTGCGCTGG CGCGGCCAGA CCCGGGGTGT CGCGTTCGTC AAAGGCGGCG ACAACGTGCT
GCGCTCGGAC GCGGTGTTCC TCCGCGGCTT CGTCCCGATG ATTGGTCAGG ACGTCGAACG
CGTCGCCGCG CTCCACGAAA ACCCGCTCGT CCAGATCCAC TACGACGTCG ACCAGGACAT
CGACCCGGAC CACCTCACCG GCGTCTTCGC CACCCCCGGG TCGCCGCCTG GTCGGGCACG
ACCATCGGGC CGCAGGACCC GATCGACGGG ATCTGGCTGC GCGCCACTGC CACCGACCCG
GCCGTCTGCC GGATCAACGC CAGCCGTGGC GCGGTCGAGG CCGATCTGTG CGTCCCGCTG
ATCCCGAACC TGAGCCCCGC GCTGGTCGCC GGCTCCTCGC TTGCCTACCT CGCCAAGCGC
CGCCTCGACG GCCCCGATCC GGTATACGAG ATCGGCGCCC ACGGCCACGG GGCTGACGGC
CAGGCCCTCG CTGAACGCCT CTGCGATCAC ATCCGGACCT GGGACACCGA CCGCAAGGCC
GGCCCGACCC TCACCGCGAT CTCGCTGACC GCCGACGCCG AGGTCCCGCC GACCGCGATC
GTCAAGAAGG ACTGTGCGAT CATCATCACC TTCTGGCAGC CGAGGGTGCC GCGTGGCCGT
ACTTGCCCGA GCGCGGGCAA TCGCGGGCAA TCGCGGGCAA TCGCGGGCAA TCGCGGCCGG
CCGGTGCTCA GCCGGTGGGA ACGATCTGCG CCGGGGCCCC GATCTGGGCG ACGATCATGG
TCCAGCGCCC GTCACCGGCG TTGA
 
Protein sequence
MRRLWEGSEK VSAGESCGEE GPTGPQPEVH ALFPSCGECR RARAEHLRRS ARGARMRDGL 
PSLTLQPPVT RCPHIPDVWA PGFGPGRSRR RAPGGRRGRR ARSDPRLVQP ACPRWADGPA
VALARPDPGC RVRQRRRQRA ALGRGVPPRL RPDDWSGRRT RRRAPRKPAR PDPLRRRPGH
RPGPPHRRLR HPRVAAWSGT TIGPQDPIDG IWLRATATDP AVCRINASRG AVEADLCVPL
IPNLSPALVA GSSLAYLAKR RLDGPDPVYE IGAHGHGADG QALAERLCDH IRTWDTDRKA
GPTLTAISLT ADAEVPPTAI VKKDCAIIIT FWQPRVPRGR TCPSAGNRGQ SRAIAGNRGR
PVLSRWERSA PGPRSGRRSW SSARHRR