Gene Francci3_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3869 
Symbol 
ID3906637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4631671 
End bp4632828 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content73% 
IMG OID637881195 
Producthypothetical protein 
Protein accessionYP_482948 
Protein GI86742548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0435346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGC CCCGTCACCC GCAGGCCGCC GGGGAAAGCC GCCTACGCGG AGTCGACGCG 
GCGCGGGGCC TCGCCCTGAT CGGCATGGTC GCGACGCACA TCTATCCCGC GGTCGGGGAT
GACGGGGCGG TGACCCCCGC GCATCTGCTC GCCGCCGGCC GGGCCTCGGC GGCCTTCGCG
GTACTCGCCG GGGTGGCGCT GGCGCTGTCG ACCGGCCGGC TGCCGGCGCC ACAGGCGCGC
GCGTCGACCG TGGCACGAGC GGTCTGCATC GGGACGATCG GCCTCGCCCT CGGCTACACC
CACTCCGGCA TCGCGGTGAT CCTCTGTTAC TACGCGCTGA TGTTCATCCT GGCCGTGCCG
CTGCTGCGGG CTCCGGTCGC AGCGCTGGTC GTCGTCACGG TGCTGGCGTT CGCGGTCGTC
CCGGCCGCGG GCCTCCTCAG CCGGGACCAT CTGCCGCCCC CGACCCTTGC CGACCCGACC
TTCGGCCGGG CGTTCACCCA CCCGGTGAAC CTGACTCTGG AGATGGGCTT CACCGGCTTC
TATCCGGCGC TTGCCTGGCT CGGGTATCTC TGCGTGGGAC TCGCGGTCGG CCGGCTGGAT
CTACGGTCCA CGCGGGTCGC CGCCGCCCTG CTCGCGGGGG GTGGCACGAT CGCCGCGGCG
GCGTCGCTGG TCTCCTGGGC CCTGCTCCGG CACGCCGCGG GCATGGCCGC ACTCGAATCC
GTCGATCCCG TCGAGGTCGC GGGAGTCGGG CCGCTGCCGG TGCGGTCCAT CCTCGACGCC
GGGCTGTACG GCAGCACCCC GACGAACACC TGGTGGTGGC TGGCCGTCGA CACCCCGCAC
TCGTCCACGC CCGTCGATCT GCTGCACACC GGCGCGGCCG CGGTCGCCCT GCTCGGGTTC
GTCCTGCTCC TGAGCCGGCT GCTGCCGCCC CTGATGCTGA TCCCGCTCGT CGCCGTCGGA
TCGATGACGC TGACCCTCTA CTGCACCCAC GTGATCGTGA TGTCCGCCTC CTTCCTCCCC
GCGGATCCGA CGCCGTCCTT TCTGCTCCAG GCGGCCGTAG CCCTGACCGT CGCCACCGCC
TGGCGGGCGA GCGGGGCGCG AGGACCGGCC GAGGCGATCG TCGCCGCGGC CACCCGGGGC
ACCCGGCAGC TCGTTTAG
 
Protein sequence
MLQPRHPQAA GESRLRGVDA ARGLALIGMV ATHIYPAVGD DGAVTPAHLL AAGRASAAFA 
VLAGVALALS TGRLPAPQAR ASTVARAVCI GTIGLALGYT HSGIAVILCY YALMFILAVP
LLRAPVAALV VVTVLAFAVV PAAGLLSRDH LPPPTLADPT FGRAFTHPVN LTLEMGFTGF
YPALAWLGYL CVGLAVGRLD LRSTRVAAAL LAGGGTIAAA ASLVSWALLR HAAGMAALES
VDPVEVAGVG PLPVRSILDA GLYGSTPTNT WWWLAVDTPH SSTPVDLLHT GAAAVALLGF
VLLLSRLLPP LMLIPLVAVG SMTLTLYCTH VIVMSASFLP ADPTPSFLLQ AAVALTVATA
WRASGARGPA EAIVAAATRG TRQLV