| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3864 |
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| Symbol | |
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| ID | 3906632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4626941 |
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| End bp | 4627885 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881190 |
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| Product | LmbE-like protein |
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| Protein accession | YP_482943 |
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| Protein GI | 86742543 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | [TIGR03445] 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0961679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACAG CTACCCCATC ATCACCCTCT ACTGCGCCAC TTCCCACCCG GCGGGCGATG
TTCGTGCACG CCCACCCCGA TGACGAGGTG ATCTCGACGG GGATCGCGCT TGCCTCGTAC
GCCGCCTCCC CCGACACCCA CGTCACCCTC GTGACGTGCA CGTTGGGGGA GGAGGGGGAG
GTACTGGTGC CCGAGCTGAT CCATCTGCGG GCGGATCGGG GCGACCAGCT CGGTGGCTAC
CGGATCGGCG AGCTGGCCGG TGCCTGCGCC GCGCTCGGCA TCACCGACCA GCGCTTTCTT
GGCGGTCCCG GGCGTTGGCG GGACAGTGGG ATGATCGGCA CCCCCGCCAA CGACCATCCC
CGCTGCCTGT GGCGGGCGGA CCTGGACGAG GCCGCGGCGG AGCTGGTGCG GATCGTGCGC
GAGGTCCGGC CGCAGGTGCT CGTCAGCTAC GACGCCCGTG GTGGTTACGG GCACCCCGAT
CACATTCGGG CCCACGAACT CACCCGGCGG GCCTTCACCG ACGCCGCCGA CCCGTCCTTC
GCCCCGCAGG CCGGTTCGGT CTGGCAGGTC GCCAAGCGCT ACGAGACGGC GCTGGCGCGA
TCGAGCGCCG TCGCGGGCTT CGAGTACTTC CGCGATTCCG CCGCTGAGAG CAACCCGTTC
GCGGGTCTGA CGTCCGTGGA CGAGTTGGGG GTGACGCTTG TCGACGATGC GGACATCACG
ACCGAGCTCT CCGCTCCCCA CTTCTTCGAG GCGAAGATCG CCGCCATGCG GTCGCACCGG
ACGCAGATGA GCGTTGACGG GTTCTTTTTC GCGCTCGCCG ACGGCATCGG CCAGCGAGCC
TGGAGTGTCG AGCACTTCGT GCTGGCCGAG GGCGCCCGGG GGCCGGGGGA CGGTCCGGAC
GGGCGGGAGC GGGACCTGTT CGCCGGTCTC GTGTGCGAGC CCTGA
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| Protein sequence | MTTATPSSPS TAPLPTRRAM FVHAHPDDEV ISTGIALASY AASPDTHVTL VTCTLGEEGE
VLVPELIHLR ADRGDQLGGY RIGELAGACA ALGITDQRFL GGPGRWRDSG MIGTPANDHP
RCLWRADLDE AAAELVRIVR EVRPQVLVSY DARGGYGHPD HIRAHELTRR AFTDAADPSF
APQAGSVWQV AKRYETALAR SSAVAGFEYF RDSAAESNPF AGLTSVDELG VTLVDDADIT
TELSAPHFFE AKIAAMRSHR TQMSVDGFFF ALADGIGQRA WSVEHFVLAE GARGPGDGPD
GRERDLFAGL VCEP
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