Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3854 |
Symbol | |
ID | 3905602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4617096 |
End bp | 4618709 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881180 |
Product | undecaprenyl-phosphate galactosephosphotransferase |
Protein accession | YP_482933 |
Protein GI | 86742533 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.147783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACA CTGTCTTCAG CCATGCACAG GTGGGGTTGG CCGCGGGGCC GGGCACGGAT GCCATCCCGA AACCGCTGGA CGGGGCCGAT GAGCCCGCCC GGTACGACGG GTACGAGGTG GGCGCGGGCC CCGGCGCGGA CGGAACATCC GACGGTGTCG TCGACTACCG GGCGAAGGTT CGCTGGGAAC GGCCGTACGG CTGGCTGCTC GTGGGTTCCG ACGCGGCCGC CTGCGTGGTC GCGGCGGGAG TGGCCTACCT GGTCCGGTTC GGCGGACTGG TTGAGTTCGA CCTGAAGCCG GTCTCCGCGA CGCCGTATGT CGCCATGTCG ATCCTGCTGC CCGTCGCGTG GGTGTTGTCG ATGTACCTGA GCCGGGCGTA CGAGAGCCGG TTCCTCGGCA GCGGCTCGGA GGAGTTCCGC CGGGTCCTCA ACGCCGCCGC GCAGCTCACC GCGGTGGTGG CCGTCCTGTC CTATGCGACC AAGGCCGAGC TCGCGCGTGC CTACGTGCTG ATCGCCTTCC CGACGGCGCT GCTGCTGACC GTGGCCGGCC GCGCCACCGC GCGCGGCTAC CTGCACCGGA TGCGCCGGGC GGGCCGCTGC CTGCACCGGG TGCTGGTGGT CGGGGCGGGG GACTCCGCGG CGGCGTTGGT CCGGCTGGCC CAGCGGGATC CGACGTCGGG TTGGTCGGTC GTCGGTGTCG TGCTCGACCG CTCGCCCGGC CGGCACAGTC ACGACTCCCC GGAACGCAGT GGGTTCGACC TGCTCGGGGT GCCGATCGTC GGCACCTCGG AAACCCTGCA CACGGCCATC CGGGCGACGT ACGCCACCAC GGTTGCCATC AGTCCGCAGA TGGACGGCGA GACGTTGCGC CGGGTGCTGT GGACGCTGGA GGGCAGCGAC GTCGACGTGC TGGTCTCCTC GGCGCTGACC GACGTGACCG GGCCGCGGAT CTCGATTCGT CCGGTGGCCG GGCTGCCGCT GCTGCACATC GAGGAGCCGG AGCTCACCGG CGCGCGGCGG GCCATGAAGG GCCTGTTCGA CCGCAGTGTG GCCGCGGGGG TTCTCCTGCT GTGCGCGCCG TTGTTCCTGG CCCTGGCGCT GGCGGTGCGC CTGACCAGTC GTGGGCCGGC CATTTTCAAG CAGATCCGGG TCGGCCGGGG TGGTGAGCAC TTCACCATGT ACAAGTTCCG GTCGATGTAC GTCGACGCGG AGGCGCGCAA GGCGGAGCTG GAGTCGCGCA ACGAGCGGGC CGAGGGGCTG CTGTTCAAGA TGCGTGACGA CCCGCGGATC ACCAAGGTCG GGAAGTTCCT GCGCAAGTGG TCGCTCGACG AGCTGCCGCA GCTGCTCAAC GTCGCGAACG GCACGATGTC GCTGGTGGGG CCGCGTCCGC CGCTGCCGTC GGAGGTCGCC CGCTACGAGG ACGACGTGCA CCGCCGGCTG ATGGTGAAGC CGGGGCTGAC CGGCCTGTGG CAGATCAGCG GCCGGTCGGA CCTCGAATGG GACGAGTCGG TGCGGTTGGA TCTGCGGTAC GTGCAGAACT GGTCGCTGCC CCTCGACTTC TACATCCTCT GGCGCACCGT GTTCGCGGTC CTGCGCCGCG AGGGTGCGTA CTGA
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Protein sequence | MTDTVFSHAQ VGLAAGPGTD AIPKPLDGAD EPARYDGYEV GAGPGADGTS DGVVDYRAKV RWERPYGWLL VGSDAAACVV AAGVAYLVRF GGLVEFDLKP VSATPYVAMS ILLPVAWVLS MYLSRAYESR FLGSGSEEFR RVLNAAAQLT AVVAVLSYAT KAELARAYVL IAFPTALLLT VAGRATARGY LHRMRRAGRC LHRVLVVGAG DSAAALVRLA QRDPTSGWSV VGVVLDRSPG RHSHDSPERS GFDLLGVPIV GTSETLHTAI RATYATTVAI SPQMDGETLR RVLWTLEGSD VDVLVSSALT DVTGPRISIR PVAGLPLLHI EEPELTGARR AMKGLFDRSV AAGVLLLCAP LFLALALAVR LTSRGPAIFK QIRVGRGGEH FTMYKFRSMY VDAEARKAEL ESRNERAEGL LFKMRDDPRI TKVGKFLRKW SLDELPQLLN VANGTMSLVG PRPPLPSEVA RYEDDVHRRL MVKPGLTGLW QISGRSDLEW DESVRLDLRY VQNWSLPLDF YILWRTVFAV LRREGAY
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