| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3843 |
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| Symbol | |
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| ID | 3905591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4603463 |
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| End bp | 4604503 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637881169 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_482922 |
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| Protein GI | 86742522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.106581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC GGGTGAGGCG TTGGAGACTG AGTCGACGCG GAGGACTGGT CGCTCTTCTT
CTCGTCTGCC TGGTCGTGGG ATGTGGAACC TCGAAACGGG AATCTGGTTC GCCGCAGGCC
ACGCCTCGAC CTTCGGTGGC TGGTCCGGGC GTTGGCGGCA TGGTGACCTC CTCCGCGCTA
CCATCCGGCC CACCGTCGGC GACCGGCGCC TCGGCAGGTT CTAGTCCCCG ATCCTCCGGA
GAGGTTTCTC CGCCGAATGG TCCGCGGACT CCGCGAGAGG ATGACGGGAT GGAGCCGCGA
CTGCTGTGGT CCGATGAATT TGACGGTCCG GCGAACGCCT CGGTTGATCC CGCCAGGTGG
TTGATCACGC AAGGGGGGAA ATGGGGGCCG ACGGACGTCT CCTGTTATAC GGCCGATCCC
CGTAACGTCG GCCTGGACGG CAAGGGCCAT CTCAAGCTGA CGGCGATTGC GGAGAAATCT
CCCGTAAAAA CCTGTGGGGA TACTCACTTC TCGTCGGGCC GGGTGGAGAC CCGCGGTAAG
GCCTCCTGGA GATATGGGTA CTTCGAGTTC CGGGCCCGGC TGCCGATCGG TACCGGGACG
TTGCCTGCTC TCTGGCTCCT AGGGCCGAAC GGAATTTATG ACTGGCCTCG CTCCGGCGAG
ATCGATGTCG TCGAGGCGAC GGCAAACGAG CCGGCCACGG TCCATACCAA CATTGTTGGA
GTGGATGGCT CTGGAAATCG TTGGGAGGCC GGCTGGTGGG GGCGGGGAAA GAACTATGTC
TACCCAGGTG GCACGCTTGC GGATCGCTAT CATAACTATG CTCTTGACTG GGGGCCGAAC
AGGCTCGACT TCTATTTCGA CGGCCTTCTC ATCCGCCATC TCGAGCCGAA GGACACGCCG
GTTTGGCTGT GGAACAAAGA CTTCTATATA ATCATGGATG TCGCCGTCAG CGCGAAGCTG
AGCCCCCCGC TTCCGCCGGC CTCCGCGTTC CCGCAGACGC TGTTCGTAGA CTATGTGCGT
GTCTATTCAG GCAGACCTTA G
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| Protein sequence | MKPRVRRWRL SRRGGLVALL LVCLVVGCGT SKRESGSPQA TPRPSVAGPG VGGMVTSSAL
PSGPPSATGA SAGSSPRSSG EVSPPNGPRT PREDDGMEPR LLWSDEFDGP ANASVDPARW
LITQGGKWGP TDVSCYTADP RNVGLDGKGH LKLTAIAEKS PVKTCGDTHF SSGRVETRGK
ASWRYGYFEF RARLPIGTGT LPALWLLGPN GIYDWPRSGE IDVVEATANE PATVHTNIVG
VDGSGNRWEA GWWGRGKNYV YPGGTLADRY HNYALDWGPN RLDFYFDGLL IRHLEPKDTP
VWLWNKDFYI IMDVAVSAKL SPPLPPASAF PQTLFVDYVR VYSGRP
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