| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3833 |
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| Symbol | |
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| ID | 3905581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4594750 |
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| End bp | 4595634 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881159 |
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| Product | RNA polymerase sigma factor SigE |
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| Protein accession | YP_482912 |
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| Protein GI | 86742512 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.326287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0286461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCAG CGGGATTCGC CGCTCCCTGG CCGGCTCGTC GGGTACGTTT GACGCGAACC
GACCGAGAGG CGGCCGTGGC TGCTCAGGAC CCCGGGGCGG GCTCGGACGC CGCCGGCGTC
GCCGCCACCG CAGAAGCTTC TGGTTGGGTT CCTCCTTCCT GGGAAGACGT GGTCCGTGAG
CACGGCAACC GGGTCTATCG CCTCGCCTAC CGCCTCACCG GTAACGCCCA CGACGCCGAG
GACCTGACGC AGGACGTGTT CGTCCGGGTG TTCCGGTCGT TGGCGGACTA CACCCCCGGC
ACCTTCGAGG GGTGGCTGCA CCGGATCACC ACCAATCTCT TCCTCGACCG CATGCGTCGC
CAGCAGAAGA TCCGGTTCGA TGCGCTGCCC GAGGACACCG AGCGGCTGGC CGGCCGCGAG
GCGAGCCCGG AGGCGGTCTA CGCCGAGGCT CATCTCGACG CGGACGTCGA GGCCGCGCTC
GCCGCTCTGC CGCCCGACTT CCGGGCCGCC GTCGTGCTGT GCGACATCGA GCAGCTCTCC
TACGAAGAGA TCGCTCAGAC GTTGGGCGTG AAACTGGGCA CAGTGCGCAG CCGGATCTCG
CGCGGTCGGG CGATGTTGCG CGCGGCGCTG GCTGATCGCG CGCCACGTAC TGGTGACGGC
GCCGCGTTGT CCGCCGCCGT GACGGTCTCG GACGACGCCC TTCTCACCGC GGAGCCCGCC
GTCGGGCCGG TGGCGGCGGA GCTCGCCGAG GCGGACGTGG CGCCGCCGGA CACGACCAGA
CCGCGTCGGG ACCGAGGCGA CGACGGGCGG CCCAGAAGCA GGGGACGGCA TGGGCCCGTC
GCCGCCGGGA GCAAGGGTGG TGCTCCGCGG GAGCGGCGGG CGTGA
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| Protein sequence | MSAAGFAAPW PARRVRLTRT DREAAVAAQD PGAGSDAAGV AATAEASGWV PPSWEDVVRE
HGNRVYRLAY RLTGNAHDAE DLTQDVFVRV FRSLADYTPG TFEGWLHRIT TNLFLDRMRR
QQKIRFDALP EDTERLAGRE ASPEAVYAEA HLDADVEAAL AALPPDFRAA VVLCDIEQLS
YEEIAQTLGV KLGTVRSRIS RGRAMLRAAL ADRAPRTGDG AALSAAVTVS DDALLTAEPA
VGPVAAELAE ADVAPPDTTR PRRDRGDDGR PRSRGRHGPV AAGSKGGAPR ERRA
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