| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3829 |
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| Symbol | |
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| ID | 3905577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4590532 |
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| End bp | 4591071 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881155 |
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| Product | sec-independent translocase |
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| Protein accession | YP_482908 |
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| Protein GI | 86742508 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB
[TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.565106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0266894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAACG GTGTCGGGTG GGGTGAAGTC GTCGTCTTGC TTCTGATCGG GCTGTTCGTC
TTCGGCCCGG ACAGGTTGCC CAAGGCCGCC AGGGACGCGG GACGCGTGCT GCGTCAGCTG
CGTCAGCTGG CCAACGGCAT GCGTAACGAT CTCAGGTCCG AGCTGGGCCC GGAATTCGCC
GATCTGGATA TCCGGGACCT GCATCCCAAG ACCTTCGTCC GCAAGCACCT GTTCGAGGAC
GATCCGGTTC TGCCGCCATA CCTCACCAAG CGGACCTCGC TCGACTCGCT GCTCCTCGGT
GACGATCCGC CCGCGGCGCC GTCACTGACC AAGTCCTCGC TGCCGAGAGA TCCCGCGGCC
AAGGATCCGG CTCGTCCCGG CGCCGAGGCC GCGGTTCCGG CGGCGCCGCC CGGTCCGGTG
TCCCCCATGC TGTCGAAGGT CTCGCCGAGC AAGGCGTCCG CCGCCCGCTC CGTGCCGGCG
CAGCCGGCAC GGAGCGACGG CCCGGCGACA GAGGTGCCCT TCGACTCGGA CGCCACCTGA
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| Protein sequence | MFNGVGWGEV VVLLLIGLFV FGPDRLPKAA RDAGRVLRQL RQLANGMRND LRSELGPEFA
DLDIRDLHPK TFVRKHLFED DPVLPPYLTK RTSLDSLLLG DDPPAAPSLT KSSLPRDPAA
KDPARPGAEA AVPAAPPGPV SPMLSKVSPS KASAARSVPA QPARSDGPAT EVPFDSDAT
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