Gene Francci3_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3828 
Symbol 
ID3905576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4589261 
End bp4590403 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID637881154 
Producthypothetical protein 
Protein accessionYP_482907 
Protein GI86742507 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.877651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0295113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTAT CCCGGCCTTC CCCCGACGCG ATTCAGTCGG CTCTGGCGAC GGTGCACGAT 
CCCGAGATCG GTCGTCCCAT CACCGAGCTG GACATGGTCT CGTCGGTTCG CGTGCTCGAC
GACGGCTCGG TCGACGTCGG GGTCCTGCTC ACCGTGTCCG GCTGCCCCAT GCGCGACGAG
ATCATCAATC GGGTCAGTCG AGCCGTCAGC GCGGTCGAGG GCGTCCGCGA GGTCCGCGTC
GATCTGCAGG TCATGTCGGA CGAGCAACGC GGTGCCCTGC ACGCGAAACT GCGGGGGGGC
AACGCCCCCA AGGCGATTCC CTTCGCCCAA CCAGGCTCGA CCACCAGGGT CTACGGCGTC
GCCAGCGGCA AGGGCGGCGT CGGCAAGTCC TCGATCACCG TGAACCTGGC CGCCGCGATG
GCCCGTTCGG GCCTGTCGGT CGGTGTGCTC GATGCCGACA TCTATGGGCA CTCCGTGCCC
CGCATGCTGG GCATCGACCG CCCGCCCACC CAGGTCGAAA AGATGATCAT GCCGCCCCAG
GCACACGGGG TGCGAGTCAT CTCCACCGGG ATGTTCACGC GCGGCAACCA GCCAGTGACC
TGGCGCGGAC CGATGCTGCA CCGTGCCCTG GAGCAGTTCC TGTCAGACGT CTTCTGGGGT
GACCTGGACG TCCTTCTCCT GGACCTACCG CCCGGCACCG GTGACATCGC CATCTCCCTG
GCCCAGCTGG TGCCGTCCTC CGAACTGCTG CTGGTCACGA CCCCGCAGCT GGCGGCCACC
GAGGTCGCCG AGCGGGCCGG GACCATCGCC GTGCAGACCC GGCAGAACGT GGTCGGGGTC
GTCGAGAACA TGGCGTGGCT GCCCTGCCCG CACTGCGGCG AGCGGGTCGA CGTGTTCGGC
TCTGGCGGCG GGGCTGCGGT GGCCGAGCGG CTGACCAGGG TGCTCGGTCA TGACGTACCG
CTGCTGGCCC AGATCCCGGT GGACGTCCGG CTCCGGGAAG GCGCCGACAA CGGCATGCCG
CTGGTCATCG GCGAGCCGGA CAGCGAGGCG GGCAAGGCCC TGCACGCGGT GGCGGGCCGG
CTCACCTACC GCTCCCGTGG GCTCGCCGGA CGCAGCCTCA ACCTCACGCC GGTGGGGCGC
TGA
 
Protein sequence
MSLSRPSPDA IQSALATVHD PEIGRPITEL DMVSSVRVLD DGSVDVGVLL TVSGCPMRDE 
IINRVSRAVS AVEGVREVRV DLQVMSDEQR GALHAKLRGG NAPKAIPFAQ PGSTTRVYGV
ASGKGGVGKS SITVNLAAAM ARSGLSVGVL DADIYGHSVP RMLGIDRPPT QVEKMIMPPQ
AHGVRVISTG MFTRGNQPVT WRGPMLHRAL EQFLSDVFWG DLDVLLLDLP PGTGDIAISL
AQLVPSSELL LVTTPQLAAT EVAERAGTIA VQTRQNVVGV VENMAWLPCP HCGERVDVFG
SGGGAAVAER LTRVLGHDVP LLAQIPVDVR LREGADNGMP LVIGEPDSEA GKALHAVAGR
LTYRSRGLAG RSLNLTPVGR